Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.14■□□□□ 0.33
LdlrP35951 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.14■□□□□ 0.33
LdlrP35951 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LdlrP35951 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LdlrP35951 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LdlrP35951 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.14■□□□□ 0.33
LdlrP35951 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LdlrP35951 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LdlrP35951 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LdlrP35951 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LdlrP35951 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LdlrP35951 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
LdlrP35951 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LdlrP35951 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LdlrP35951 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.13■□□□□ 0.33
LdlrP35951 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
LdlrP35951 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LdlrP35951 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
LdlrP35951 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LdlrP35951 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
LdlrP35951 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LdlrP35951 Dio3-201ENSMUST00000097228 1449 ntBASIC17.13■□□□□ 0.33
LdlrP35951 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LdlrP35951 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LdlrP35951 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LdlrP35951 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LdlrP35951 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LdlrP35951 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LdlrP35951 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LdlrP35951 Gm715-201ENSMUST00000117865 831 ntBASIC17.12■□□□□ 0.33
LdlrP35951 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LdlrP35951 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LdlrP35951 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
LdlrP35951 Gm2559-201ENSMUST00000201323 363 ntBASIC17.12■□□□□ 0.33
LdlrP35951 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
LdlrP35951 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LdlrP35951 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LdlrP35951 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LdlrP35951 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LdlrP35951 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
LdlrP35951 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.12■□□□□ 0.33
LdlrP35951 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
LdlrP35951 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LdlrP35951 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LdlrP35951 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LdlrP35951 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LdlrP35951 Gm2399-201ENSMUST00000104944 225 ntBASIC17.11■□□□□ 0.33
LdlrP35951 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
LdlrP35951 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.11■□□□□ 0.33
LdlrP35951 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
LdlrP35951 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.11■□□□□ 0.33
LdlrP35951 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
LdlrP35951 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LdlrP35951 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LdlrP35951 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
LdlrP35951 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LdlrP35951 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
LdlrP35951 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LdlrP35951 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LdlrP35951 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LdlrP35951 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LdlrP35951 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.1■□□□□ 0.33
LdlrP35951 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.1■□□□□ 0.33
LdlrP35951 Zfp783-201ENSMUST00000095946 670 ntBASIC17.1■□□□□ 0.33
LdlrP35951 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LdlrP35951 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LdlrP35951 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LdlrP35951 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
LdlrP35951 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LdlrP35951 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.1■□□□□ 0.33
LdlrP35951 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
LdlrP35951 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LdlrP35951 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LdlrP35951 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LdlrP35951 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LdlrP35951 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LdlrP35951 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LdlrP35951 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.09■□□□□ 0.33
LdlrP35951 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.09■□□□□ 0.33
LdlrP35951 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.09■□□□□ 0.33
LdlrP35951 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LdlrP35951 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LdlrP35951 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LdlrP35951 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.09■□□□□ 0.33
LdlrP35951 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LdlrP35951 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
LdlrP35951 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.09■□□□□ 0.33
LdlrP35951 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LdlrP35951 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LdlrP35951 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
LdlrP35951 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.09■□□□□ 0.33
LdlrP35951 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LdlrP35951 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.08■□□□□ 0.33
LdlrP35951 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LdlrP35951 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LdlrP35951 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
LdlrP35951 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LdlrP35951 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LdlrP35951 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
LdlrP35951 Mir2861-201ENSMUST00000175539 82 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms