Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc6a1P31648 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Slc6a1P31648 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc6a1P31648 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc6a1P31648 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc6a1P31648 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc6a1P31648 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc6a1P31648 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc6a1P31648 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Slc6a1P31648 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc6a1P31648 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc6a1P31648 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Slc6a1P31648 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Slc6a1P31648 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC14.82□□□□□ -0.04
Slc6a1P31648 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Slc6a1P31648 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC14.82□□□□□ -0.04
Slc6a1P31648 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc6a1P31648 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc6a1P31648 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC14.82□□□□□ -0.04
Slc6a1P31648 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc6a1P31648 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.82□□□□□ -0.04
Slc6a1P31648 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc6a1P31648 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc6a1P31648 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc6a1P31648 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc6a1P31648 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Slc6a1P31648 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc6a1P31648 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc6a1P31648 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc6a1P31648 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc6a1P31648 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc6a1P31648 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Slc6a1P31648 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc6a1P31648 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Slc6a1P31648 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc6a1P31648 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Slc6a1P31648 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Slc6a1P31648 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC14.81□□□□□ -0.04
Slc6a1P31648 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Slc6a1P31648 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc6a1P31648 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc6a1P31648 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc6a1P31648 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Slc6a1P31648 Reep4-203ENSMUST00000226563 1444 ntBASIC14.81□□□□□ -0.04
Slc6a1P31648 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Slc6a1P31648 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc6a1P31648 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc6a1P31648 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Slc6a1P31648 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Slc6a1P31648 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Slc6a1P31648 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc6a1P31648 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Slc6a1P31648 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc6a1P31648 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Slc6a1P31648 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc6a1P31648 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc6a1P31648 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc6a1P31648 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc6a1P31648 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc6a1P31648 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc6a1P31648 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC14.8□□□□□ -0.04
Slc6a1P31648 Spcs1-207ENSMUST00000228767 1008 ntBASIC14.8□□□□□ -0.04
Slc6a1P31648 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc6a1P31648 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Slc6a1P31648 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc6a1P31648 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc6a1P31648 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc6a1P31648 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc6a1P31648 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc6a1P31648 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Slc6a1P31648 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc6a1P31648 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc6a1P31648 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.8□□□□□ -0.04
Slc6a1P31648 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc6a1P31648 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Slc6a1P31648 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc6a1P31648 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc6a1P31648 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Slc6a1P31648 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC14.79□□□□□ -0.04
Slc6a1P31648 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Slc6a1P31648 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.79□□□□□ -0.04
Slc6a1P31648 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Slc6a1P31648 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.79□□□□□ -0.04
Slc6a1P31648 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Slc6a1P31648 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc6a1P31648 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc6a1P31648 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc6a1P31648 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Slc6a1P31648 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Slc6a1P31648 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc6a1P31648 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc6a1P31648 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc6a1P31648 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc6a1P31648 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc6a1P31648 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.78□□□□□ -0.04
Slc6a1P31648 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.78□□□□□ -0.04
Slc6a1P31648 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Slc6a1P31648 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc6a1P31648 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc6a1P31648 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms