Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Gm44771-201ENSMUST00000206975 626 ntBASIC17.79■□□□□ 0.44
Hoxd8P23463 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.79■□□□□ 0.44
Hoxd8P23463 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.79■□□□□ 0.44
Hoxd8P23463 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxd8P23463 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxd8P23463 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxd8P23463 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.79■□□□□ 0.44
Hoxd8P23463 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxd8P23463 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxd8P23463 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxd8P23463 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.78■□□□□ 0.44
Hoxd8P23463 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Hoxd8P23463 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxd8P23463 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxd8P23463 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Hoxd8P23463 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.78■□□□□ 0.44
Hoxd8P23463 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.78■□□□□ 0.44
Hoxd8P23463 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxd8P23463 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Hoxd8P23463 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxd8P23463 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxd8P23463 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Hoxd8P23463 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.78■□□□□ 0.44
Hoxd8P23463 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxd8P23463 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxd8P23463 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxd8P23463 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxd8P23463 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxd8P23463 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxd8P23463 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxd8P23463 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxd8P23463 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.77■□□□□ 0.44
Hoxd8P23463 Gm7153-201ENSMUST00000117092 455 ntBASIC17.77■□□□□ 0.44
Hoxd8P23463 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.77■□□□□ 0.44
Hoxd8P23463 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.77■□□□□ 0.44
Hoxd8P23463 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxd8P23463 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxd8P23463 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxd8P23463 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.77■□□□□ 0.44
Hoxd8P23463 Phf7-203ENSMUST00000226565 1971 ntBASIC17.77■□□□□ 0.43
Hoxd8P23463 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hoxd8P23463 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hoxd8P23463 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hoxd8P23463 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Hoxd8P23463 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.76■□□□□ 0.43
Hoxd8P23463 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.76■□□□□ 0.43
Hoxd8P23463 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hoxd8P23463 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.76■□□□□ 0.43
Hoxd8P23463 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hoxd8P23463 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hoxd8P23463 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hoxd8P23463 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Hoxd8P23463 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hoxd8P23463 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hoxd8P23463 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hoxd8P23463 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hoxd8P23463 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxd8P23463 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxd8P23463 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxd8P23463 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.75■□□□□ 0.43
Hoxd8P23463 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxd8P23463 Gm44450-201ENSMUST00000199528 114 ntBASIC17.75■□□□□ 0.43
Hoxd8P23463 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.75■□□□□ 0.43
Hoxd8P23463 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxd8P23463 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Hoxd8P23463 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Hoxd8P23463 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxd8P23463 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxd8P23463 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxd8P23463 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxd8P23463 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxd8P23463 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Hoxd8P23463 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Hoxd8P23463 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxd8P23463 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxd8P23463 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxd8P23463 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Hoxd8P23463 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Hoxd8P23463 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.74■□□□□ 0.43
Hoxd8P23463 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxd8P23463 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxd8P23463 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.74■□□□□ 0.43
Hoxd8P23463 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Hoxd8P23463 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxd8P23463 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxd8P23463 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxd8P23463 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxd8P23463 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxd8P23463 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxd8P23463 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxd8P23463 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxd8P23463 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.74■□□□□ 0.43
Hoxd8P23463 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxd8P23463 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.73■□□□□ 0.43
Hoxd8P23463 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxd8P23463 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxd8P23463 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxd8P23463 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxd8P23463 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxd8P23463 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms