Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
Pde6bP23440 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pde6bP23440 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pde6bP23440 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pde6bP23440 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pde6bP23440 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pde6bP23440 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pde6bP23440 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
Pde6bP23440 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pde6bP23440 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pde6bP23440 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pde6bP23440 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pde6bP23440 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Pde6bP23440 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pde6bP23440 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pde6bP23440 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pde6bP23440 Gm7370-201ENSMUST00000219471 767 ntBASIC18.73■□□□□ 0.59
Pde6bP23440 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.73■□□□□ 0.59
Pde6bP23440 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pde6bP23440 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pde6bP23440 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pde6bP23440 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pde6bP23440 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pde6bP23440 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pde6bP23440 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pde6bP23440 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.72■□□□□ 0.59
Pde6bP23440 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pde6bP23440 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.72■□□□□ 0.59
Pde6bP23440 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pde6bP23440 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pde6bP23440 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Pde6bP23440 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.72■□□□□ 0.59
Pde6bP23440 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.72■□□□□ 0.59
Pde6bP23440 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Pde6bP23440 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pde6bP23440 Gm21559-201ENSMUST00000220638 855 ntBASIC18.72■□□□□ 0.59
Pde6bP23440 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pde6bP23440 Gm8587-201ENSMUST00000076538 843 ntBASIC18.72■□□□□ 0.59
Pde6bP23440 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pde6bP23440 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pde6bP23440 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.72■□□□□ 0.59
Pde6bP23440 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pde6bP23440 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pde6bP23440 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pde6bP23440 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.72■□□□□ 0.59
Pde6bP23440 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Pde6bP23440 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pde6bP23440 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pde6bP23440 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pde6bP23440 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pde6bP23440 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pde6bP23440 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.71■□□□□ 0.59
Pde6bP23440 Il3ra-202ENSMUST00000223589 738 ntBASIC18.71■□□□□ 0.59
Pde6bP23440 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pde6bP23440 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pde6bP23440 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pde6bP23440 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pde6bP23440 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pde6bP23440 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.71■□□□□ 0.59
Pde6bP23440 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pde6bP23440 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pde6bP23440 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pde6bP23440 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pde6bP23440 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Pde6bP23440 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pde6bP23440 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Pde6bP23440 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pde6bP23440 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pde6bP23440 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pde6bP23440 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pde6bP23440 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.7■□□□□ 0.58
Pde6bP23440 Mir1668-201ENSMUST00000184114 107 ntBASIC18.7■□□□□ 0.58
Pde6bP23440 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pde6bP23440 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pde6bP23440 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pde6bP23440 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pde6bP23440 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pde6bP23440 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pde6bP23440 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pde6bP23440 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Pde6bP23440 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pde6bP23440 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pde6bP23440 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.69■□□□□ 0.58
Pde6bP23440 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.69■□□□□ 0.58
Pde6bP23440 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pde6bP23440 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Pde6bP23440 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pde6bP23440 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pde6bP23440 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pde6bP23440 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pde6bP23440 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pde6bP23440 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pde6bP23440 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pde6bP23440 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pde6bP23440 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pde6bP23440 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pde6bP23440 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pde6bP23440 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pde6bP23440 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pde6bP23440 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms