Protein–RNA interactions for Protein: P14576

Srp54, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54P14576 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.9■□□□□ 0.3
Srp54P14576 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Srp54P14576 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Srp54P14576 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Srp54P14576 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Srp54P14576 Gm16061-201ENSMUST00000122167 857 ntBASIC16.9■□□□□ 0.3
Srp54P14576 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.9■□□□□ 0.3
Srp54P14576 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Srp54P14576 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Srp54P14576 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.9■□□□□ 0.3
Srp54P14576 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Srp54P14576 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Srp54P14576 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Srp54P14576 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Srp54P14576 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Srp54P14576 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Srp54P14576 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Srp54P14576 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.9■□□□□ 0.3
Srp54P14576 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Srp54P14576 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Srp54P14576 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Srp54P14576 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Srp54P14576 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Srp54P14576 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Srp54P14576 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Srp54P14576 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Srp54P14576 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.89■□□□□ 0.29
Srp54P14576 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Srp54P14576 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.89■□□□□ 0.29
Srp54P14576 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Srp54P14576 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Srp54P14576 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Srp54P14576 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Srp54P14576 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Srp54P14576 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Srp54P14576 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.89■□□□□ 0.29
Srp54P14576 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Srp54P14576 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Srp54P14576 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Srp54P14576 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Srp54P14576 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Srp54P14576 Gm13474-201ENSMUST00000122466 815 ntBASIC16.88■□□□□ 0.29
Srp54P14576 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.88■□□□□ 0.29
Srp54P14576 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.88■□□□□ 0.29
Srp54P14576 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Srp54P14576 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.88■□□□□ 0.29
Srp54P14576 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Srp54P14576 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Srp54P14576 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Srp54P14576 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Srp54P14576 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Srp54P14576 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Srp54P14576 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Srp54P14576 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Srp54P14576 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Srp54P14576 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Srp54P14576 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Srp54P14576 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Srp54P14576 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Srp54P14576 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.87■□□□□ 0.29
Srp54P14576 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Srp54P14576 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Srp54P14576 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.87■□□□□ 0.29
Srp54P14576 Gm18101-201ENSMUST00000215769 548 ntBASIC16.87■□□□□ 0.29
Srp54P14576 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.87■□□□□ 0.29
Srp54P14576 Il3ra-202ENSMUST00000223589 738 ntBASIC16.87■□□□□ 0.29
Srp54P14576 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Srp54P14576 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.87■□□□□ 0.29
Srp54P14576 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Srp54P14576 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Srp54P14576 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Srp54P14576 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Srp54P14576 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Srp54P14576 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Srp54P14576 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Srp54P14576 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Srp54P14576 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Srp54P14576 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.86■□□□□ 0.29
Srp54P14576 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.86■□□□□ 0.29
Srp54P14576 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Srp54P14576 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Srp54P14576 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Srp54P14576 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Srp54P14576 Gm22697-201ENSMUST00000175194 63 ntBASIC16.86■□□□□ 0.29
Srp54P14576 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.86■□□□□ 0.29
Srp54P14576 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.86■□□□□ 0.29
Srp54P14576 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Srp54P14576 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Srp54P14576 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.86■□□□□ 0.29
Srp54P14576 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Srp54P14576 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Srp54P14576 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Srp54P14576 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Srp54P14576 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Srp54P14576 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.86■□□□□ 0.29
Srp54P14576 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Srp54P14576 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Srp54P14576 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Srp54P14576 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Srp54P14576 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms