Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rb1P13405 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.56■□□□□ 0.4
Rb1P13405 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rb1P13405 Gm27463-201ENSMUST00000183569 57 ntBASIC17.56■□□□□ 0.4
Rb1P13405 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rb1P13405 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.56■□□□□ 0.4
Rb1P13405 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rb1P13405 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rb1P13405 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rb1P13405 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rb1P13405 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rb1P13405 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rb1P13405 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rb1P13405 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rb1P13405 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Rb1P13405 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rb1P13405 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rb1P13405 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Rb1P13405 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rb1P13405 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rb1P13405 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rb1P13405 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rb1P13405 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rb1P13405 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rb1P13405 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rb1P13405 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rb1P13405 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.55■□□□□ 0.4
Rb1P13405 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rb1P13405 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rb1P13405 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rb1P13405 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rb1P13405 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Rb1P13405 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rb1P13405 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rb1P13405 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rb1P13405 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rb1P13405 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Rb1P13405 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rb1P13405 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.54■□□□□ 0.4
Rb1P13405 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rb1P13405 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rb1P13405 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.54■□□□□ 0.4
Rb1P13405 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rb1P13405 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Rb1P13405 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rb1P13405 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.54■□□□□ 0.4
Rb1P13405 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rb1P13405 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rb1P13405 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rb1P13405 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.53■□□□□ 0.4
Rb1P13405 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rb1P13405 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rb1P13405 Gm10013-201ENSMUST00000106074 672 ntBASIC17.53■□□□□ 0.4
Rb1P13405 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rb1P13405 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rb1P13405 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Rb1P13405 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rb1P13405 Gm10819-201ENSMUST00000099988 561 ntBASIC17.53■□□□□ 0.4
Rb1P13405 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rb1P13405 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rb1P13405 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rb1P13405 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Rb1P13405 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rb1P13405 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Rb1P13405 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rb1P13405 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Rb1P13405 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Rb1P13405 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rb1P13405 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rb1P13405 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rb1P13405 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rb1P13405 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.52■□□□□ 0.4
Rb1P13405 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rb1P13405 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rb1P13405 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rb1P13405 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Rb1P13405 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rb1P13405 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rb1P13405 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.52■□□□□ 0.4
Rb1P13405 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.52■□□□□ 0.4
Rb1P13405 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.52■□□□□ 0.4
Rb1P13405 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rb1P13405 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Rb1P13405 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.52■□□□□ 0.39
Rb1P13405 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rb1P13405 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Rb1P13405 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rb1P13405 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Rb1P13405 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rb1P13405 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Rb1P13405 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Rb1P13405 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rb1P13405 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rb1P13405 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rb1P13405 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Rb1P13405 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Rb1P13405 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rb1P13405 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Rb1P13405 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Rb1P13405 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms