Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccl1P10146 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccl1P10146 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC13.42□□□□□ -0.26
Ccl1P10146 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccl1P10146 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccl1P10146 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.42□□□□□ -0.26
Ccl1P10146 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Ccl1P10146 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ccl1P10146 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Ccl1P10146 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccl1P10146 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC13.42□□□□□ -0.26
Ccl1P10146 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccl1P10146 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccl1P10146 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
Ccl1P10146 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccl1P10146 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Ccl1P10146 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccl1P10146 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccl1P10146 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccl1P10146 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ccl1P10146 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ccl1P10146 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccl1P10146 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Ccl1P10146 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccl1P10146 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccl1P10146 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccl1P10146 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccl1P10146 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ccl1P10146 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC13.41□□□□□ -0.26
Ccl1P10146 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Ccl1P10146 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC13.41□□□□□ -0.26
Ccl1P10146 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ccl1P10146 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC13.41□□□□□ -0.26
Ccl1P10146 Rps24-207ENSMUST00000224568 714 ntBASIC13.41□□□□□ -0.26
Ccl1P10146 Gm9847-201ENSMUST00000052528 599 ntBASIC13.41□□□□□ -0.26
Ccl1P10146 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccl1P10146 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Ccl1P10146 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Ccl1P10146 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccl1P10146 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ccl1P10146 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccl1P10146 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Ccl1P10146 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Ccl1P10146 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccl1P10146 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccl1P10146 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccl1P10146 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.41□□□□□ -0.26
Ccl1P10146 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccl1P10146 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccl1P10146 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccl1P10146 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccl1P10146 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccl1P10146 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ccl1P10146 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccl1P10146 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccl1P10146 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ccl1P10146 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccl1P10146 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccl1P10146 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccl1P10146 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccl1P10146 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ccl1P10146 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ccl1P10146 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC13.4□□□□□ -0.26
Ccl1P10146 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccl1P10146 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ccl1P10146 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Ccl1P10146 Wdr70-203ENSMUST00000227371 1130 ntBASIC13.4□□□□□ -0.26
Ccl1P10146 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccl1P10146 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccl1P10146 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Ccl1P10146 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Ccl1P10146 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccl1P10146 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccl1P10146 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Ccl1P10146 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccl1P10146 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Ccl1P10146 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Ccl1P10146 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccl1P10146 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ccl1P10146 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccl1P10146 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccl1P10146 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccl1P10146 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccl1P10146 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccl1P10146 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccl1P10146 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC13.39□□□□□ -0.27
Ccl1P10146 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ccl1P10146 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccl1P10146 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccl1P10146 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccl1P10146 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccl1P10146 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccl1P10146 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccl1P10146 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC13.39□□□□□ -0.27
Ccl1P10146 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccl1P10146 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Ccl1P10146 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl1P10146 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl1P10146 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl1P10146 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms