Protein–RNA interactions for Protein: P08775

Polr2a, DNA-directed RNA polymerase II subunit RPB1, mousemouse

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2aP08775 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Polr2aP08775 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Polr2aP08775 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Polr2aP08775 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Polr2aP08775 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Polr2aP08775 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Polr2aP08775 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Polr2aP08775 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Polr2aP08775 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.65■□□□□ 0.74
Polr2aP08775 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Polr2aP08775 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Polr2aP08775 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Polr2aP08775 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Polr2aP08775 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC19.64■□□□□ 0.74
Polr2aP08775 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Polr2aP08775 Gm43575-201ENSMUST00000196420 516 ntBASIC19.64■□□□□ 0.74
Polr2aP08775 Gm13830-205ENSMUST00000201195 1155 ntBASIC19.64■□□□□ 0.74
Polr2aP08775 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Polr2aP08775 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Polr2aP08775 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Polr2aP08775 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.64■□□□□ 0.73
Polr2aP08775 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Polr2aP08775 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Polr2aP08775 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Polr2aP08775 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC19.64■□□□□ 0.73
Polr2aP08775 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC19.64■□□□□ 0.73
Polr2aP08775 Wnt10b-204ENSMUST00000226655 1807 ntBASIC19.64■□□□□ 0.73
Polr2aP08775 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Polr2aP08775 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.63■□□□□ 0.73
Polr2aP08775 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC19.63■□□□□ 0.73
Polr2aP08775 Gm13036-201ENSMUST00000117799 748 ntBASIC19.63■□□□□ 0.73
Polr2aP08775 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC19.63■□□□□ 0.73
Polr2aP08775 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Polr2aP08775 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC19.63■□□□□ 0.73
Polr2aP08775 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Polr2aP08775 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Polr2aP08775 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Polr2aP08775 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.63■□□□□ 0.73
Polr2aP08775 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Polr2aP08775 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Polr2aP08775 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC19.63■□□□□ 0.73
Polr2aP08775 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC19.63■□□□□ 0.73
Polr2aP08775 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC19.63■□□□□ 0.73
Polr2aP08775 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
Polr2aP08775 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Polr2aP08775 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Polr2aP08775 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Polr2aP08775 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Polr2aP08775 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Polr2aP08775 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Polr2aP08775 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Polr2aP08775 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Polr2aP08775 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Polr2aP08775 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Polr2aP08775 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Polr2aP08775 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Polr2aP08775 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Polr2aP08775 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC19.61■□□□□ 0.73
Polr2aP08775 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Polr2aP08775 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Polr2aP08775 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Polr2aP08775 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Polr2aP08775 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Polr2aP08775 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Polr2aP08775 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Polr2aP08775 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Polr2aP08775 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Polr2aP08775 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Polr2aP08775 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Polr2aP08775 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Polr2aP08775 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Polr2aP08775 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC19.6■□□□□ 0.73
Polr2aP08775 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Polr2aP08775 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Polr2aP08775 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Polr2aP08775 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Polr2aP08775 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Polr2aP08775 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Polr2aP08775 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Polr2aP08775 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
Polr2aP08775 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
Polr2aP08775 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Polr2aP08775 Gm6190-201ENSMUST00000220683 1374 ntBASIC19.59■□□□□ 0.73
Polr2aP08775 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Polr2aP08775 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Polr2aP08775 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Polr2aP08775 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Polr2aP08775 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Polr2aP08775 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Polr2aP08775 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Polr2aP08775 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Polr2aP08775 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Polr2aP08775 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Polr2aP08775 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Polr2aP08775 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Polr2aP08775 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Polr2aP08775 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Polr2aP08775 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC19.59■□□□□ 0.73
Polr2aP08775 AC154621.1-201ENSMUST00000226155 1119 ntBASIC19.59■□□□□ 0.73
Polr2aP08775 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms