Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
P06344 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
P06344 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
P06344 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
P06344 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
P06344 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
P06344 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
P06344 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
P06344 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
P06344 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
P06344 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
P06344 Gm7638-201ENSMUST00000121348 967 ntBASIC15.34■□□□□ 0.05
P06344 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
P06344 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
P06344 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
P06344 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC15.34■□□□□ 0.05
P06344 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
P06344 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.34■□□□□ 0.05
P06344 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
P06344 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
P06344 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
P06344 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
P06344 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.33■□□□□ 0.05
P06344 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
P06344 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.33■□□□□ 0.05
P06344 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
P06344 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
P06344 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
P06344 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
P06344 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.33■□□□□ 0.04
P06344 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.33■□□□□ 0.04
P06344 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.33■□□□□ 0.04
P06344 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.33■□□□□ 0.04
P06344 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
P06344 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
P06344 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
P06344 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
P06344 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
P06344 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
P06344 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.33■□□□□ 0.04
P06344 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
P06344 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P06344 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.32■□□□□ 0.04
P06344 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P06344 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P06344 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P06344 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P06344 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P06344 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
P06344 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
P06344 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
P06344 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
P06344 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
P06344 Gm10231-201ENSMUST00000181584 441 ntBASIC15.32■□□□□ 0.04
P06344 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P06344 Gm10175-202ENSMUST00000208752 441 ntBASIC15.32■□□□□ 0.04
P06344 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
P06344 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.32■□□□□ 0.04
P06344 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.32■□□□□ 0.04
P06344 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P06344 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P06344 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P06344 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P06344 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.32■□□□□ 0.04
P06344 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
P06344 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
P06344 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
P06344 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
P06344 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
P06344 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P06344 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
P06344 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.32■□□□□ 0.04
P06344 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P06344 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
P06344 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P06344 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
P06344 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.31■□□□□ 0.04
P06344 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P06344 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
P06344 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
P06344 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.31■□□□□ 0.04
P06344 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
P06344 Gm37025-201ENSMUST00000195159 829 ntBASIC15.31■□□□□ 0.04
P06344 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
P06344 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P06344 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P06344 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
P06344 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P06344 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
P06344 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
P06344 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
P06344 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
P06344 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P06344 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
P06344 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.3■□□□□ 0.04
P06344 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
P06344 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
P06344 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
P06344 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.3■□□□□ 0.04
P06344 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms