Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC10.92□□□□□ -0.66
P06320 Gm45102-201ENSMUST00000207427 857 ntBASIC10.92□□□□□ -0.66
P06320 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
P06320 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
P06320 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
P06320 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
P06320 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
P06320 Gm26917-202ENSMUST00000192833 3329 ntBASIC10.92□□□□□ -0.66
P06320 Gm38345-201ENSMUST00000192635 1748 ntBASIC10.92□□□□□ -0.66
P06320 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
P06320 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
P06320 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
P06320 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
P06320 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
P06320 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
P06320 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
P06320 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
P06320 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
P06320 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
P06320 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
P06320 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
P06320 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
P06320 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
P06320 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
P06320 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
P06320 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
P06320 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
P06320 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
P06320 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC10.91□□□□□ -0.66
P06320 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
P06320 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
P06320 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
P06320 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
P06320 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
P06320 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
P06320 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
P06320 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
P06320 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
P06320 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
P06320 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC10.91□□□□□ -0.66
P06320 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
P06320 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
P06320 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
P06320 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
P06320 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC10.91□□□□□ -0.66
P06320 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
P06320 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
P06320 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC10.9□□□□□ -0.66
P06320 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
P06320 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P06320 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
P06320 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
P06320 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
P06320 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
P06320 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
P06320 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P06320 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
P06320 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
P06320 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
P06320 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P06320 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P06320 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC10.9□□□□□ -0.66
P06320 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P06320 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC10.9□□□□□ -0.66
P06320 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
P06320 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC10.9□□□□□ -0.66
P06320 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC10.9□□□□□ -0.66
P06320 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC10.9□□□□□ -0.66
P06320 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC10.9□□□□□ -0.66
P06320 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
P06320 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P06320 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
P06320 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P06320 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P06320 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P06320 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P06320 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P06320 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
P06320 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
P06320 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P06320 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P06320 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P06320 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
P06320 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC10.9□□□□□ -0.66
P06320 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
P06320 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
P06320 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
P06320 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
P06320 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
P06320 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
P06320 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
P06320 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
P06320 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC10.89□□□□□ -0.67
P06320 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P06320 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC10.89□□□□□ -0.67
P06320 Idnk-204ENSMUST00000226010 1898 ntBASIC10.89□□□□□ -0.67
P06320 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P06320 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
P06320 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
P06320 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms