Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
P01852 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
P01852 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.73■□□□□ 0.11
P01852 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
P01852 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
P01852 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
P01852 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
P01852 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
P01852 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
P01852 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC15.73■□□□□ 0.11
P01852 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
P01852 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC15.73■□□□□ 0.11
P01852 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
P01852 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
P01852 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
P01852 Mir8112-201ENSMUST00000184382 131 ntBASIC15.73■□□□□ 0.11
P01852 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC15.73■□□□□ 0.11
P01852 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.73■□□□□ 0.11
P01852 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.73■□□□□ 0.11
P01852 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
P01852 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
P01852 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
P01852 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
P01852 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
P01852 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
P01852 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
P01852 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
P01852 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
P01852 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.73■□□□□ 0.11
P01852 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
P01852 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.73■□□□□ 0.11
P01852 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
P01852 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
P01852 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.73■□□□□ 0.11
P01852 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
P01852 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
P01852 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
P01852 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
P01852 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
P01852 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
P01852 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
P01852 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
P01852 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
P01852 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
P01852 Gm12085-201ENSMUST00000119263 940 ntBASIC15.72■□□□□ 0.11
P01852 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.72■□□□□ 0.11
P01852 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC15.72■□□□□ 0.11
P01852 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC15.72■□□□□ 0.11
P01852 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.72■□□□□ 0.11
P01852 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
P01852 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
P01852 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
P01852 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
P01852 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
P01852 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
P01852 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
P01852 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P01852 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P01852 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P01852 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
P01852 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
P01852 Gm24841-201ENSMUST00000158676 357 ntBASIC15.71■□□□□ 0.11
P01852 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC15.71■□□□□ 0.11
P01852 Gm38027-201ENSMUST00000192315 235 ntBASIC15.71■□□□□ 0.11
P01852 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P01852 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.71■□□□□ 0.11
P01852 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.71■□□□□ 0.11
P01852 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
P01852 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P01852 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P01852 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
P01852 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
P01852 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P01852 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.7■□□□□ 0.1
P01852 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.7■□□□□ 0.1
P01852 Gm8969-201ENSMUST00000199694 526 ntBASIC15.7■□□□□ 0.1
P01852 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.7■□□□□ 0.1
P01852 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
P01852 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
P01852 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P01852 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P01852 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.7■□□□□ 0.1
P01852 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
P01852 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
P01852 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
P01852 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
P01852 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.7■□□□□ 0.1
P01852 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.7■□□□□ 0.1
P01852 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P01852 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
P01852 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P01852 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P01852 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P01852 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P01852 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
P01852 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
P01852 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P01852 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P01852 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
P01852 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms