Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TcraP01849 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TcraP01849 Gm19094-201ENSMUST00000209791 1246 ntBASIC12.61□□□□□ -0.39
TcraP01849 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TcraP01849 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
TcraP01849 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
TcraP01849 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TcraP01849 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TcraP01849 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TcraP01849 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC12.61□□□□□ -0.39
TcraP01849 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TcraP01849 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
TcraP01849 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC12.61□□□□□ -0.39
TcraP01849 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TcraP01849 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TcraP01849 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TcraP01849 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TcraP01849 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TcraP01849 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TcraP01849 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TcraP01849 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TcraP01849 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TcraP01849 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TcraP01849 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TcraP01849 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC12.6□□□□□ -0.39
TcraP01849 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC12.6□□□□□ -0.39
TcraP01849 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC12.6□□□□□ -0.39
TcraP01849 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
TcraP01849 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
TcraP01849 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
TcraP01849 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
TcraP01849 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TcraP01849 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TcraP01849 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TcraP01849 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
TcraP01849 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TcraP01849 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TcraP01849 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TcraP01849 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TcraP01849 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TcraP01849 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC12.59□□□□□ -0.39
TcraP01849 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
TcraP01849 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TcraP01849 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TcraP01849 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
TcraP01849 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC12.59□□□□□ -0.39
TcraP01849 Cdc34b-202ENSMUST00000188741 1252 ntBASIC12.59□□□□□ -0.39
TcraP01849 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TcraP01849 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TcraP01849 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
TcraP01849 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
TcraP01849 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC12.59□□□□□ -0.39
TcraP01849 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TcraP01849 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
TcraP01849 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TcraP01849 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
TcraP01849 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TcraP01849 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TcraP01849 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC12.59□□□□□ -0.39
TcraP01849 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TcraP01849 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TcraP01849 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
TcraP01849 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TcraP01849 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
TcraP01849 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TcraP01849 Idnk-204ENSMUST00000226010 1898 ntBASIC12.59□□□□□ -0.39
TcraP01849 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TcraP01849 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TcraP01849 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TcraP01849 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TcraP01849 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC12.59□□□□□ -0.39
TcraP01849 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
TcraP01849 Gm16401-202ENSMUST00000197463 2074 ntBASIC12.58□□□□□ -0.39
TcraP01849 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
TcraP01849 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
TcraP01849 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
TcraP01849 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.58□□□□□ -0.4
TcraP01849 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TcraP01849 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TcraP01849 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.58□□□□□ -0.4
TcraP01849 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TcraP01849 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TcraP01849 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TcraP01849 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TcraP01849 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TcraP01849 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TcraP01849 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TcraP01849 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.58□□□□□ -0.4
TcraP01849 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TcraP01849 Gm27032-201ENSMUST00000183124 1116 ntBASIC12.58□□□□□ -0.4
TcraP01849 Gm43060-201ENSMUST00000200621 289 ntBASIC12.58□□□□□ -0.4
TcraP01849 CT010478.1-201ENSMUST00000220747 2787 ntBASIC12.58□□□□□ -0.4
TcraP01849 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TcraP01849 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC12.58□□□□□ -0.4
TcraP01849 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TcraP01849 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TcraP01849 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TcraP01849 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
TcraP01849 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TcraP01849 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms