Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Igh-VJ558P01758 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Igh-VJ558P01758 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Igh-VJ558P01758 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Igh-VJ558P01758 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Igh-VJ558P01758 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Igh-VJ558P01758 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Igh-VJ558P01758 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Igh-VJ558P01758 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Igh-VJ558P01758 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Igh-VJ558P01758 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Igh-VJ558P01758 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Igh-VJ558P01758 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Igh-VJ558P01758 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Igh-VJ558P01758 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Igh-VJ558P01758 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Igh-VJ558P01758 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Igh-VJ558P01758 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Igh-VJ558P01758 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Igh-VJ558P01758 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Igh-VJ558P01758 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Igh-VJ558P01758 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Igh-VJ558P01758 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.86□□□□□ -0.03
Igh-VJ558P01758 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Igh-VJ558P01758 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.86□□□□□ -0.03
Igh-VJ558P01758 AC154649.1-201ENSMUST00000227392 384 ntBASIC14.86□□□□□ -0.03
Igh-VJ558P01758 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Igh-VJ558P01758 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Igh-VJ558P01758 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Igh-VJ558P01758 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Igh-VJ558P01758 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Igh-VJ558P01758 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Igh-VJ558P01758 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Igh-VJ558P01758 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Igh-VJ558P01758 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Igh-VJ558P01758 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Igh-VJ558P01758 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Igh-VJ558P01758 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Igh-VJ558P01758 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Igh-VJ558P01758 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Igh-VJ558P01758 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Igh-VJ558P01758 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Igh-VJ558P01758 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Igh-VJ558P01758 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Igh-VJ558P01758 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Igh-VJ558P01758 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Igh-VJ558P01758 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Igh-VJ558P01758 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Igh-VJ558P01758 Gm38027-201ENSMUST00000192315 235 ntBASIC14.85□□□□□ -0.03
Igh-VJ558P01758 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC14.85□□□□□ -0.03
Igh-VJ558P01758 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Igh-VJ558P01758 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Igh-VJ558P01758 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Igh-VJ558P01758 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Igh-VJ558P01758 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Igh-VJ558P01758 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Igh-VJ558P01758 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Igh-VJ558P01758 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Igh-VJ558P01758 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Igh-VJ558P01758 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Igh-VJ558P01758 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Igh-VJ558P01758 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Igh-VJ558P01758 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Igh-VJ558P01758 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Igh-VJ558P01758 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Igh-VJ558P01758 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Igh-VJ558P01758 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Igh-VJ558P01758 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Igh-VJ558P01758 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.84□□□□□ -0.03
Igh-VJ558P01758 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Igh-VJ558P01758 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Igh-VJ558P01758 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Igh-VJ558P01758 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Igh-VJ558P01758 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Igh-VJ558P01758 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Igh-VJ558P01758 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Igh-VJ558P01758 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Igh-VJ558P01758 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Igh-VJ558P01758 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Igh-VJ558P01758 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Igh-VJ558P01758 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Igh-VJ558P01758 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Igh-VJ558P01758 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Igh-VJ558P01758 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Igh-VJ558P01758 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Igh-VJ558P01758 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Igh-VJ558P01758 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
Igh-VJ558P01758 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Igh-VJ558P01758 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.83□□□□□ -0.03
Igh-VJ558P01758 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Igh-VJ558P01758 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.83□□□□□ -0.04
Igh-VJ558P01758 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Igh-VJ558P01758 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Igh-VJ558P01758 Gm7638-201ENSMUST00000121348 967 ntBASIC14.83□□□□□ -0.04
Igh-VJ558P01758 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Igh-VJ558P01758 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.83□□□□□ -0.04
Igh-VJ558P01758 Gm9731-201ENSMUST00000209480 747 ntBASIC14.83□□□□□ -0.04
Igh-VJ558P01758 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Igh-VJ558P01758 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Igh-VJ558P01758 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms