Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hcn1O88704 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.47■□□□□ 0.23
Hcn1O88704 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Hcn1O88704 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Hcn1O88704 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hcn1O88704 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Hcn1O88704 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.47■□□□□ 0.23
Hcn1O88704 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hcn1O88704 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hcn1O88704 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Hcn1O88704 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Hcn1O88704 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Hcn1O88704 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Hcn1O88704 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hcn1O88704 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Hcn1O88704 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.47■□□□□ 0.23
Hcn1O88704 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hcn1O88704 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hcn1O88704 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.46■□□□□ 0.23
Hcn1O88704 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hcn1O88704 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hcn1O88704 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hcn1O88704 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hcn1O88704 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hcn1O88704 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.46■□□□□ 0.23
Hcn1O88704 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hcn1O88704 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hcn1O88704 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hcn1O88704 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.46■□□□□ 0.23
Hcn1O88704 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hcn1O88704 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Hcn1O88704 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Hcn1O88704 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Hcn1O88704 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Hcn1O88704 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hcn1O88704 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Hcn1O88704 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hcn1O88704 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Hcn1O88704 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
Hcn1O88704 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Hcn1O88704 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.45■□□□□ 0.22
Hcn1O88704 Mir6349-201ENSMUST00000184059 97 ntBASIC16.45■□□□□ 0.22
Hcn1O88704 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hcn1O88704 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.45■□□□□ 0.22
Hcn1O88704 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hcn1O88704 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hcn1O88704 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hcn1O88704 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.45■□□□□ 0.22
Hcn1O88704 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hcn1O88704 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hcn1O88704 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
Hcn1O88704 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hcn1O88704 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hcn1O88704 Haglr-201ENSMUST00000100000 2085 ntBASIC16.44■□□□□ 0.22
Hcn1O88704 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hcn1O88704 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hcn1O88704 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Hcn1O88704 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hcn1O88704 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Hcn1O88704 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hcn1O88704 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hcn1O88704 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.44■□□□□ 0.22
Hcn1O88704 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.44■□□□□ 0.22
Hcn1O88704 Mir2861-201ENSMUST00000175539 82 ntBASIC16.44■□□□□ 0.22
Hcn1O88704 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.44■□□□□ 0.22
Hcn1O88704 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Hcn1O88704 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.44■□□□□ 0.22
Hcn1O88704 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hcn1O88704 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.44■□□□□ 0.22
Hcn1O88704 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hcn1O88704 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hcn1O88704 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Hcn1O88704 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.43■□□□□ 0.22
Hcn1O88704 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hcn1O88704 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hcn1O88704 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.43■□□□□ 0.22
Hcn1O88704 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hcn1O88704 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hcn1O88704 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Hcn1O88704 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hcn1O88704 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hcn1O88704 Gm18025-201ENSMUST00000221733 862 ntBASIC16.43■□□□□ 0.22
Hcn1O88704 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hcn1O88704 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Hcn1O88704 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Hcn1O88704 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hcn1O88704 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hcn1O88704 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hcn1O88704 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hcn1O88704 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hcn1O88704 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hcn1O88704 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hcn1O88704 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Hcn1O88704 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Hcn1O88704 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hcn1O88704 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Hcn1O88704 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.42■□□□□ 0.22
Hcn1O88704 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.42■□□□□ 0.22
Hcn1O88704 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hcn1O88704 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms