Protein–RNA interactions for Protein: O88627

Slc28a2, Sodium/nucleoside cotransporter 2, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a2O88627 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Slc28a2O88627 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Slc28a2O88627 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc28a2O88627 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc28a2O88627 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Slc28a2O88627 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Slc28a2O88627 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc28a2O88627 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC15.33■□□□□ 0.04
Slc28a2O88627 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.33■□□□□ 0.04
Slc28a2O88627 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Slc28a2O88627 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Slc28a2O88627 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.33■□□□□ 0.04
Slc28a2O88627 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Slc28a2O88627 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc28a2O88627 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc28a2O88627 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Slc28a2O88627 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC15.33■□□□□ 0.04
Slc28a2O88627 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Slc28a2O88627 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc28a2O88627 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc28a2O88627 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc28a2O88627 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc28a2O88627 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc28a2O88627 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc28a2O88627 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc28a2O88627 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc28a2O88627 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc28a2O88627 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Slc28a2O88627 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc28a2O88627 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc28a2O88627 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc28a2O88627 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.32■□□□□ 0.04
Slc28a2O88627 Gm38285-201ENSMUST00000192928 922 ntBASIC15.32■□□□□ 0.04
Slc28a2O88627 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc28a2O88627 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Slc28a2O88627 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc28a2O88627 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc28a2O88627 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Slc28a2O88627 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc28a2O88627 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.32■□□□□ 0.04
Slc28a2O88627 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc28a2O88627 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.32■□□□□ 0.04
Slc28a2O88627 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc28a2O88627 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Slc28a2O88627 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Slc28a2O88627 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc28a2O88627 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc28a2O88627 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc28a2O88627 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc28a2O88627 Gm2559-201ENSMUST00000201323 363 ntBASIC15.31■□□□□ 0.04
Slc28a2O88627 Zfp783-201ENSMUST00000095946 670 ntBASIC15.31■□□□□ 0.04
Slc28a2O88627 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Slc28a2O88627 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc28a2O88627 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Slc28a2O88627 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Slc28a2O88627 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc28a2O88627 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc28a2O88627 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Slc28a2O88627 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc28a2O88627 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.31■□□□□ 0.04
Slc28a2O88627 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Slc28a2O88627 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc28a2O88627 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc28a2O88627 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc28a2O88627 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc28a2O88627 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Slc28a2O88627 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc28a2O88627 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc28a2O88627 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc28a2O88627 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc28a2O88627 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc28a2O88627 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Slc28a2O88627 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Slc28a2O88627 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc28a2O88627 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc28a2O88627 Gm15847-201ENSMUST00000121417 1065 ntBASIC15.3■□□□□ 0.04
Slc28a2O88627 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC15.3■□□□□ 0.04
Slc28a2O88627 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc28a2O88627 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc28a2O88627 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Slc28a2O88627 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc28a2O88627 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc28a2O88627 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc28a2O88627 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Slc28a2O88627 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Slc28a2O88627 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc28a2O88627 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Slc28a2O88627 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc28a2O88627 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc28a2O88627 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.29■□□□□ 0.04
Slc28a2O88627 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.29■□□□□ 0.04
Slc28a2O88627 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.29■□□□□ 0.04
Slc28a2O88627 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Slc28a2O88627 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc28a2O88627 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc28a2O88627 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc28a2O88627 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc28a2O88627 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Slc28a2O88627 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc28a2O88627 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms