Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cldn1O88551 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Cldn1O88551 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Cldn1O88551 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC14.74□□□□□ -0.05
Cldn1O88551 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cldn1O88551 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cldn1O88551 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cldn1O88551 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cldn1O88551 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Cldn1O88551 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
Cldn1O88551 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.74□□□□□ -0.05
Cldn1O88551 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cldn1O88551 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cldn1O88551 Gm5867-201ENSMUST00000063197 592 ntBASIC14.74□□□□□ -0.05
Cldn1O88551 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cldn1O88551 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Cldn1O88551 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cldn1O88551 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cldn1O88551 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cldn1O88551 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cldn1O88551 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cldn1O88551 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cldn1O88551 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cldn1O88551 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cldn1O88551 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Cldn1O88551 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cldn1O88551 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cldn1O88551 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cldn1O88551 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Cldn1O88551 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cldn1O88551 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cldn1O88551 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cldn1O88551 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.73□□□□□ -0.05
Cldn1O88551 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.73□□□□□ -0.05
Cldn1O88551 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cldn1O88551 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.73□□□□□ -0.05
Cldn1O88551 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Cldn1O88551 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cldn1O88551 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cldn1O88551 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cldn1O88551 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cldn1O88551 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cldn1O88551 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cldn1O88551 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cldn1O88551 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Cldn1O88551 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cldn1O88551 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cldn1O88551 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cldn1O88551 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cldn1O88551 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cldn1O88551 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.72□□□□□ -0.05
Cldn1O88551 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Cldn1O88551 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cldn1O88551 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cldn1O88551 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cldn1O88551 Gm7638-201ENSMUST00000121348 967 ntBASIC14.72□□□□□ -0.05
Cldn1O88551 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Cldn1O88551 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cldn1O88551 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Cldn1O88551 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Cldn1O88551 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cldn1O88551 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cldn1O88551 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cldn1O88551 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cldn1O88551 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cldn1O88551 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cldn1O88551 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cldn1O88551 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cldn1O88551 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Cldn1O88551 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cldn1O88551 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cldn1O88551 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.71□□□□□ -0.05
Cldn1O88551 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Cldn1O88551 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.71□□□□□ -0.05
Cldn1O88551 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Cldn1O88551 Mzt1-203ENSMUST00000227948 952 ntBASIC14.71□□□□□ -0.05
Cldn1O88551 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
Cldn1O88551 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cldn1O88551 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cldn1O88551 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC14.71□□□□□ -0.05
Cldn1O88551 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cldn1O88551 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cldn1O88551 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Cldn1O88551 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cldn1O88551 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cldn1O88551 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC14.71□□□□□ -0.06
Cldn1O88551 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cldn1O88551 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Cldn1O88551 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cldn1O88551 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cldn1O88551 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC14.7□□□□□ -0.06
Cldn1O88551 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.7□□□□□ -0.06
Cldn1O88551 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Cldn1O88551 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cldn1O88551 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cldn1O88551 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cldn1O88551 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Cldn1O88551 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cldn1O88551 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cldn1O88551 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms