Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ttc3O88196 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ttc3O88196 Gm11336-201ENSMUST00000118168 334 ntBASIC18.04■□□□□ 0.48
Ttc3O88196 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.04■□□□□ 0.48
Ttc3O88196 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ttc3O88196 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.04■□□□□ 0.48
Ttc3O88196 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ttc3O88196 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ttc3O88196 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Ttc3O88196 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Ttc3O88196 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ttc3O88196 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ttc3O88196 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ttc3O88196 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ttc3O88196 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.04■□□□□ 0.48
Ttc3O88196 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ttc3O88196 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ttc3O88196 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ttc3O88196 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ttc3O88196 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ttc3O88196 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ttc3O88196 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ttc3O88196 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ttc3O88196 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ttc3O88196 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ttc3O88196 Olfr129-201ENSMUST00000122318 993 ntBASIC18.03■□□□□ 0.48
Ttc3O88196 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.03■□□□□ 0.48
Ttc3O88196 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ttc3O88196 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ttc3O88196 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Ttc3O88196 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Ttc3O88196 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Ttc3O88196 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ttc3O88196 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ttc3O88196 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ttc3O88196 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ttc3O88196 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ttc3O88196 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ttc3O88196 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ttc3O88196 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Ttc3O88196 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.02■□□□□ 0.48
Ttc3O88196 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ttc3O88196 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC18.02■□□□□ 0.48
Ttc3O88196 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ttc3O88196 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ttc3O88196 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.02■□□□□ 0.48
Ttc3O88196 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.02■□□□□ 0.48
Ttc3O88196 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ttc3O88196 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ttc3O88196 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ttc3O88196 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ttc3O88196 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ttc3O88196 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ttc3O88196 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ttc3O88196 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC18.02■□□□□ 0.47
Ttc3O88196 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Ttc3O88196 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.02■□□□□ 0.47
Ttc3O88196 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Ttc3O88196 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Ttc3O88196 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ttc3O88196 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ttc3O88196 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ttc3O88196 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ttc3O88196 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ttc3O88196 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ttc3O88196 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ttc3O88196 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ttc3O88196 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ttc3O88196 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ttc3O88196 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Ttc3O88196 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ttc3O88196 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ttc3O88196 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ttc3O88196 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ttc3O88196 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ttc3O88196 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Ttc3O88196 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ttc3O88196 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Ttc3O88196 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ttc3O88196 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Ttc3O88196 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ttc3O88196 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC18■□□□□ 0.47
Ttc3O88196 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ttc3O88196 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ttc3O88196 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Ttc3O88196 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Ttc3O88196 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Ttc3O88196 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18■□□□□ 0.47
Ttc3O88196 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ttc3O88196 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ttc3O88196 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ttc3O88196 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ttc3O88196 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Ttc3O88196 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ttc3O88196 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ttc3O88196 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ttc3O88196 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Ttc3O88196 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ttc3O88196 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ttc3O88196 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms