Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pja1O55176 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pja1O55176 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pja1O55176 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pja1O55176 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pja1O55176 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pja1O55176 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pja1O55176 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Pja1O55176 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pja1O55176 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.2■□□□□ 0.5
Pja1O55176 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pja1O55176 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pja1O55176 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pja1O55176 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pja1O55176 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.19■□□□□ 0.5
Pja1O55176 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.19■□□□□ 0.5
Pja1O55176 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.19■□□□□ 0.5
Pja1O55176 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pja1O55176 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pja1O55176 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pja1O55176 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Pja1O55176 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.19■□□□□ 0.5
Pja1O55176 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pja1O55176 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Pja1O55176 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Pja1O55176 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.19■□□□□ 0.5
Pja1O55176 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pja1O55176 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Pja1O55176 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pja1O55176 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Pja1O55176 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pja1O55176 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pja1O55176 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Pja1O55176 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Pja1O55176 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pja1O55176 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Pja1O55176 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pja1O55176 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pja1O55176 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.18■□□□□ 0.5
Pja1O55176 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Pja1O55176 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.18■□□□□ 0.5
Pja1O55176 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Pja1O55176 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pja1O55176 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.18■□□□□ 0.5
Pja1O55176 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pja1O55176 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pja1O55176 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Pja1O55176 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pja1O55176 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pja1O55176 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pja1O55176 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pja1O55176 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pja1O55176 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Pja1O55176 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.18■□□□□ 0.5
Pja1O55176 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pja1O55176 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pja1O55176 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pja1O55176 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pja1O55176 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Pja1O55176 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.17■□□□□ 0.5
Pja1O55176 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
Pja1O55176 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.17■□□□□ 0.5
Pja1O55176 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pja1O55176 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pja1O55176 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pja1O55176 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pja1O55176 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pja1O55176 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pja1O55176 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pja1O55176 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pja1O55176 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.16■□□□□ 0.5
Pja1O55176 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Pja1O55176 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.16■□□□□ 0.5
Pja1O55176 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pja1O55176 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Pja1O55176 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pja1O55176 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Pja1O55176 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.16■□□□□ 0.5
Pja1O55176 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pja1O55176 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pja1O55176 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pja1O55176 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Pja1O55176 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pja1O55176 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pja1O55176 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pja1O55176 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.15■□□□□ 0.5
Pja1O55176 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pja1O55176 Gm11249-201ENSMUST00000117071 859 ntBASIC18.15■□□□□ 0.5
Pja1O55176 Gm37179-201ENSMUST00000194862 823 ntBASIC18.15■□□□□ 0.5
Pja1O55176 Gm5408-201ENSMUST00000197998 747 ntBASIC18.15■□□□□ 0.5
Pja1O55176 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.15■□□□□ 0.5
Pja1O55176 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pja1O55176 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Pja1O55176 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pja1O55176 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.15■□□□□ 0.5
Pja1O55176 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pja1O55176 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pja1O55176 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pja1O55176 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pja1O55176 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms