Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Pde6dO55057 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pde6dO55057 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pde6dO55057 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pde6dO55057 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pde6dO55057 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pde6dO55057 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pde6dO55057 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pde6dO55057 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pde6dO55057 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pde6dO55057 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Pde6dO55057 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pde6dO55057 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pde6dO55057 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Pde6dO55057 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Pde6dO55057 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pde6dO55057 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pde6dO55057 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Pde6dO55057 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Pde6dO55057 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pde6dO55057 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pde6dO55057 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Pde6dO55057 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pde6dO55057 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pde6dO55057 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pde6dO55057 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pde6dO55057 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pde6dO55057 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC13.61□□□□□ -0.23
Pde6dO55057 Mir8112-201ENSMUST00000184382 131 ntBASIC13.61□□□□□ -0.23
Pde6dO55057 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pde6dO55057 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pde6dO55057 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pde6dO55057 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pde6dO55057 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pde6dO55057 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pde6dO55057 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pde6dO55057 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pde6dO55057 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pde6dO55057 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pde6dO55057 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pde6dO55057 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.6□□□□□ -0.23
Pde6dO55057 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pde6dO55057 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pde6dO55057 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pde6dO55057 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pde6dO55057 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pde6dO55057 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pde6dO55057 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pde6dO55057 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Pde6dO55057 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Pde6dO55057 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Pde6dO55057 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC13.6□□□□□ -0.23
Pde6dO55057 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pde6dO55057 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Pde6dO55057 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pde6dO55057 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Pde6dO55057 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pde6dO55057 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Pde6dO55057 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pde6dO55057 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Pde6dO55057 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pde6dO55057 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pde6dO55057 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pde6dO55057 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.6□□□□□ -0.23
Pde6dO55057 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pde6dO55057 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pde6dO55057 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pde6dO55057 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pde6dO55057 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pde6dO55057 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pde6dO55057 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pde6dO55057 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pde6dO55057 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pde6dO55057 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pde6dO55057 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pde6dO55057 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC13.59□□□□□ -0.23
Pde6dO55057 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pde6dO55057 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Pde6dO55057 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pde6dO55057 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pde6dO55057 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pde6dO55057 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pde6dO55057 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pde6dO55057 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Pde6dO55057 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pde6dO55057 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pde6dO55057 Gm12251-201ENSMUST00000117893 792 ntBASIC13.59□□□□□ -0.23
Pde6dO55057 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC13.59□□□□□ -0.23
Pde6dO55057 Gm43137-201ENSMUST00000198052 594 ntBASIC13.59□□□□□ -0.23
Pde6dO55057 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pde6dO55057 Gm9959-201ENSMUST00000068277 390 ntBASIC13.59□□□□□ -0.23
Pde6dO55057 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pde6dO55057 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Pde6dO55057 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.59□□□□□ -0.23
Pde6dO55057 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC13.59□□□□□ -0.23
Pde6dO55057 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pde6dO55057 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pde6dO55057 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.59□□□□□ -0.23
Pde6dO55057 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pde6dO55057 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms