Protein–RNA interactions for Protein: O35980

Nthl1, Endonuclease III-like protein 1, mousemouse

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nthl1O35980 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nthl1O35980 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nthl1O35980 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Nthl1O35980 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nthl1O35980 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nthl1O35980 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nthl1O35980 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nthl1O35980 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nthl1O35980 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nthl1O35980 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
Nthl1O35980 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nthl1O35980 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Nthl1O35980 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nthl1O35980 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nthl1O35980 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
Nthl1O35980 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nthl1O35980 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Nthl1O35980 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.08■□□□□ 0.32
Nthl1O35980 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nthl1O35980 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.08■□□□□ 0.32
Nthl1O35980 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nthl1O35980 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nthl1O35980 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nthl1O35980 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nthl1O35980 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nthl1O35980 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Nthl1O35980 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.07■□□□□ 0.32
Nthl1O35980 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.07■□□□□ 0.32
Nthl1O35980 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nthl1O35980 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nthl1O35980 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nthl1O35980 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Nthl1O35980 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.07■□□□□ 0.32
Nthl1O35980 Gm5587-201ENSMUST00000206270 674 ntBASIC17.07■□□□□ 0.32
Nthl1O35980 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nthl1O35980 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nthl1O35980 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nthl1O35980 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nthl1O35980 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Nthl1O35980 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nthl1O35980 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.07■□□□□ 0.32
Nthl1O35980 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Nthl1O35980 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.07■□□□□ 0.32
Nthl1O35980 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nthl1O35980 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nthl1O35980 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nthl1O35980 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Nthl1O35980 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nthl1O35980 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nthl1O35980 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nthl1O35980 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Nthl1O35980 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.06■□□□□ 0.32
Nthl1O35980 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nthl1O35980 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nthl1O35980 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nthl1O35980 Gm26039-201ENSMUST00000158152 144 ntBASIC17.06■□□□□ 0.32
Nthl1O35980 Gm18958-201ENSMUST00000174258 762 ntBASIC17.06■□□□□ 0.32
Nthl1O35980 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nthl1O35980 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nthl1O35980 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nthl1O35980 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nthl1O35980 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Nthl1O35980 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nthl1O35980 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nthl1O35980 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nthl1O35980 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nthl1O35980 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nthl1O35980 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nthl1O35980 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nthl1O35980 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nthl1O35980 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nthl1O35980 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Nthl1O35980 Gm14859-201ENSMUST00000117752 357 ntBASIC17.05■□□□□ 0.32
Nthl1O35980 Gm7284-201ENSMUST00000131667 944 ntBASIC17.05■□□□□ 0.32
Nthl1O35980 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nthl1O35980 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nthl1O35980 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nthl1O35980 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nthl1O35980 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Nthl1O35980 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Nthl1O35980 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Nthl1O35980 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nthl1O35980 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.05■□□□□ 0.32
Nthl1O35980 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nthl1O35980 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.05■□□□□ 0.32
Nthl1O35980 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nthl1O35980 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.05■□□□□ 0.32
Nthl1O35980 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nthl1O35980 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nthl1O35980 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nthl1O35980 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Nthl1O35980 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nthl1O35980 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Nthl1O35980 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nthl1O35980 Rarb-207ENSMUST00000225921 2756 ntBASIC17.04■□□□□ 0.32
Nthl1O35980 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nthl1O35980 Gm9013-201ENSMUST00000132939 882 ntBASIC17.04■□□□□ 0.32
Nthl1O35980 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.04■□□□□ 0.32
Nthl1O35980 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.04■□□□□ 0.32
Nthl1O35980 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms