Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Nr1i3O35627 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nr1i3O35627 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nr1i3O35627 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Nr1i3O35627 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nr1i3O35627 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nr1i3O35627 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nr1i3O35627 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nr1i3O35627 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nr1i3O35627 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nr1i3O35627 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nr1i3O35627 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nr1i3O35627 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nr1i3O35627 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nr1i3O35627 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nr1i3O35627 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Nr1i3O35627 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nr1i3O35627 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nr1i3O35627 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.49■□□□□ 0.55
Nr1i3O35627 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nr1i3O35627 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.49■□□□□ 0.55
Nr1i3O35627 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nr1i3O35627 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Nr1i3O35627 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Nr1i3O35627 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.48■□□□□ 0.55
Nr1i3O35627 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nr1i3O35627 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nr1i3O35627 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nr1i3O35627 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nr1i3O35627 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nr1i3O35627 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nr1i3O35627 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nr1i3O35627 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nr1i3O35627 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Nr1i3O35627 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nr1i3O35627 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nr1i3O35627 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nr1i3O35627 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Nr1i3O35627 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nr1i3O35627 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nr1i3O35627 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nr1i3O35627 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nr1i3O35627 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Nr1i3O35627 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nr1i3O35627 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nr1i3O35627 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Nr1i3O35627 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nr1i3O35627 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nr1i3O35627 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nr1i3O35627 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Nr1i3O35627 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Nr1i3O35627 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nr1i3O35627 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nr1i3O35627 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nr1i3O35627 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Nr1i3O35627 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.46■□□□□ 0.55
Nr1i3O35627 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.46■□□□□ 0.55
Nr1i3O35627 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Nr1i3O35627 Gm43183-201ENSMUST00000200632 547 ntBASIC18.46■□□□□ 0.55
Nr1i3O35627 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nr1i3O35627 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nr1i3O35627 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nr1i3O35627 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
Nr1i3O35627 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Nr1i3O35627 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nr1i3O35627 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.46■□□□□ 0.55
Nr1i3O35627 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Nr1i3O35627 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Nr1i3O35627 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Nr1i3O35627 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nr1i3O35627 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nr1i3O35627 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nr1i3O35627 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nr1i3O35627 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nr1i3O35627 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nr1i3O35627 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Nr1i3O35627 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nr1i3O35627 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nr1i3O35627 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.45■□□□□ 0.54
Nr1i3O35627 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nr1i3O35627 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.45■□□□□ 0.54
Nr1i3O35627 Gm37856-201ENSMUST00000191634 999 ntBASIC18.45■□□□□ 0.54
Nr1i3O35627 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nr1i3O35627 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nr1i3O35627 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.45■□□□□ 0.54
Nr1i3O35627 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nr1i3O35627 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nr1i3O35627 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.45■□□□□ 0.54
Nr1i3O35627 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
Nr1i3O35627 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nr1i3O35627 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.45■□□□□ 0.54
Nr1i3O35627 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Nr1i3O35627 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nr1i3O35627 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nr1i3O35627 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Nr1i3O35627 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nr1i3O35627 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nr1i3O35627 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nr1i3O35627 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Nr1i3O35627 Gm17661-201ENSMUST00000170317 270 ntBASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms