Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc1a6O35544 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc1a6O35544 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc1a6O35544 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Slc1a6O35544 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Slc1a6O35544 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Slc1a6O35544 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.96■□□□□ 0.31
Slc1a6O35544 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.96■□□□□ 0.31
Slc1a6O35544 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.96■□□□□ 0.31
Slc1a6O35544 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
Slc1a6O35544 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
Slc1a6O35544 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Slc1a6O35544 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Slc1a6O35544 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Slc1a6O35544 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC16.96■□□□□ 0.31
Slc1a6O35544 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Slc1a6O35544 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Slc1a6O35544 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Slc1a6O35544 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Slc1a6O35544 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Slc1a6O35544 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Slc1a6O35544 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Slc1a6O35544 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.96■□□□□ 0.31
Slc1a6O35544 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Slc1a6O35544 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Slc1a6O35544 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Slc1a6O35544 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Slc1a6O35544 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slc1a6O35544 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Slc1a6O35544 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slc1a6O35544 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slc1a6O35544 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Slc1a6O35544 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slc1a6O35544 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slc1a6O35544 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Slc1a6O35544 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slc1a6O35544 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.95■□□□□ 0.3
Slc1a6O35544 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.95■□□□□ 0.3
Slc1a6O35544 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Slc1a6O35544 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.95■□□□□ 0.3
Slc1a6O35544 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Slc1a6O35544 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slc1a6O35544 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slc1a6O35544 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Slc1a6O35544 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.95■□□□□ 0.3
Slc1a6O35544 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Slc1a6O35544 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Slc1a6O35544 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slc1a6O35544 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slc1a6O35544 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Slc1a6O35544 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc1a6O35544 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc1a6O35544 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc1a6O35544 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Slc1a6O35544 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Slc1a6O35544 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc1a6O35544 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.94■□□□□ 0.3
Slc1a6O35544 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc1a6O35544 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc1a6O35544 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Slc1a6O35544 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Slc1a6O35544 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc1a6O35544 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc1a6O35544 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc1a6O35544 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Slc1a6O35544 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC16.94■□□□□ 0.3
Slc1a6O35544 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.94■□□□□ 0.3
Slc1a6O35544 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Slc1a6O35544 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc1a6O35544 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc1a6O35544 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Slc1a6O35544 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Slc1a6O35544 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Slc1a6O35544 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slc1a6O35544 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.93■□□□□ 0.3
Slc1a6O35544 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Slc1a6O35544 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slc1a6O35544 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Slc1a6O35544 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slc1a6O35544 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Slc1a6O35544 Gm11927-201ENSMUST00000118472 759 ntBASIC16.93■□□□□ 0.3
Slc1a6O35544 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC16.93■□□□□ 0.3
Slc1a6O35544 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Slc1a6O35544 Mir6349-201ENSMUST00000184059 97 ntBASIC16.93■□□□□ 0.3
Slc1a6O35544 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.93■□□□□ 0.3
Slc1a6O35544 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Slc1a6O35544 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slc1a6O35544 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slc1a6O35544 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slc1a6O35544 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Slc1a6O35544 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Slc1a6O35544 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.93■□□□□ 0.3
Slc1a6O35544 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Slc1a6O35544 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Slc1a6O35544 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Slc1a6O35544 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Slc1a6O35544 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slc1a6O35544 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Slc1a6O35544 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Slc1a6O35544 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms