Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.12
Col15a1O35206 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.12
Col15a1O35206 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Col15a1O35206 Gm43514-201ENSMUST00000198852 424 ntBASIC22.08■■□□□ 1.12
Col15a1O35206 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Col15a1O35206 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC22.08■■□□□ 1.12
Col15a1O35206 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Col15a1O35206 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Col15a1O35206 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Col15a1O35206 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Col15a1O35206 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
Col15a1O35206 Gm15372-201ENSMUST00000120729 834 ntBASIC22.07■■□□□ 1.12
Col15a1O35206 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC22.07■■□□□ 1.12
Col15a1O35206 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC22.07■■□□□ 1.12
Col15a1O35206 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC22.07■■□□□ 1.12
Col15a1O35206 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC22.07■■□□□ 1.12
Col15a1O35206 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC22.07■■□□□ 1.12
Col15a1O35206 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
Col15a1O35206 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Col15a1O35206 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Col15a1O35206 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Col15a1O35206 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Col15a1O35206 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Col15a1O35206 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Col15a1O35206 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Col15a1O35206 Gm6443-201ENSMUST00000203599 874 ntBASIC22.06■■□□□ 1.12
Col15a1O35206 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC22.06■■□□□ 1.12
Col15a1O35206 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Col15a1O35206 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Col15a1O35206 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC22.06■■□□□ 1.12
Col15a1O35206 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Col15a1O35206 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Col15a1O35206 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Col15a1O35206 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Col15a1O35206 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Col15a1O35206 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC22.05■■□□□ 1.12
Col15a1O35206 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
Col15a1O35206 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Col15a1O35206 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Col15a1O35206 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Col15a1O35206 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Col15a1O35206 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Col15a1O35206 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Col15a1O35206 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Col15a1O35206 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Col15a1O35206 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Col15a1O35206 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC22.04■■□□□ 1.12
Col15a1O35206 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Col15a1O35206 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Col15a1O35206 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Col15a1O35206 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Col15a1O35206 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Col15a1O35206 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC22.04■■□□□ 1.12
Col15a1O35206 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col15a1O35206 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
Col15a1O35206 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC22.03■■□□□ 1.12
Col15a1O35206 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col15a1O35206 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col15a1O35206 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col15a1O35206 Gm6190-201ENSMUST00000220683 1374 ntBASIC22.03■■□□□ 1.12
Col15a1O35206 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Col15a1O35206 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Col15a1O35206 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col15a1O35206 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Col15a1O35206 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC22.02■■□□□ 1.12
Col15a1O35206 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC22.02■■□□□ 1.12
Col15a1O35206 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Col15a1O35206 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Col15a1O35206 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Col15a1O35206 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Col15a1O35206 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Col15a1O35206 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Col15a1O35206 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.11
Col15a1O35206 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.11
Col15a1O35206 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Col15a1O35206 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Col15a1O35206 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Col15a1O35206 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Col15a1O35206 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Col15a1O35206 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC22.01■■□□□ 1.11
Col15a1O35206 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC22.01■■□□□ 1.11
Col15a1O35206 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Col15a1O35206 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Col15a1O35206 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Col15a1O35206 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Col15a1O35206 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Col15a1O35206 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Col15a1O35206 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Col15a1O35206 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Col15a1O35206 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
Col15a1O35206 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Col15a1O35206 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC22■■□□□ 1.11
Col15a1O35206 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC22■■□□□ 1.11
Col15a1O35206 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Col15a1O35206 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC22■■□□□ 1.11
Col15a1O35206 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Col15a1O35206 Gm11452-201ENSMUST00000122376 690 ntBASIC21.99■■□□□ 1.11
Col15a1O35206 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC21.99■■□□□ 1.11
Col15a1O35206 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC21.99■■□□□ 1.11
Col15a1O35206 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC21.99■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms