Protein–RNA interactions for Protein: H3BJZ2

Cdhr4, Cadherin-related family member 4, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr4H3BJZ2 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr4H3BJZ2 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cdhr4H3BJZ2 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cdhr4H3BJZ2 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr4H3BJZ2 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr4H3BJZ2 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr4H3BJZ2 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr4H3BJZ2 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr4H3BJZ2 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Cdhr4H3BJZ2 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr4H3BJZ2 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Cdhr4H3BJZ2 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr4H3BJZ2 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr4H3BJZ2 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr4H3BJZ2 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.26■□□□□ 0.03
Cdhr4H3BJZ2 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr4H3BJZ2 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr4H3BJZ2 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr4H3BJZ2 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr4H3BJZ2 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr4H3BJZ2 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr4H3BJZ2 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.26■□□□□ 0.03
Cdhr4H3BJZ2 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Cdhr4H3BJZ2 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr4H3BJZ2 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr4H3BJZ2 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC15.26■□□□□ 0.03
Cdhr4H3BJZ2 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr4H3BJZ2 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC15.26■□□□□ 0.03
Cdhr4H3BJZ2 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr4H3BJZ2 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr4H3BJZ2 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cdhr4H3BJZ2 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.26■□□□□ 0.03
Cdhr4H3BJZ2 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr4H3BJZ2 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr4H3BJZ2 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr4H3BJZ2 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr4H3BJZ2 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr4H3BJZ2 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Cdhr4H3BJZ2 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr4H3BJZ2 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Cdhr4H3BJZ2 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.25■□□□□ 0.03
Cdhr4H3BJZ2 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdhr4H3BJZ2 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdhr4H3BJZ2 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdhr4H3BJZ2 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdhr4H3BJZ2 Gm10418-201ENSMUST00000100943 576 ntBASIC15.25■□□□□ 0.03
Cdhr4H3BJZ2 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdhr4H3BJZ2 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdhr4H3BJZ2 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdhr4H3BJZ2 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdhr4H3BJZ2 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Cdhr4H3BJZ2 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Cdhr4H3BJZ2 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdhr4H3BJZ2 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.25■□□□□ 0.03
Cdhr4H3BJZ2 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdhr4H3BJZ2 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdhr4H3BJZ2 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdhr4H3BJZ2 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdhr4H3BJZ2 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdhr4H3BJZ2 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdhr4H3BJZ2 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdhr4H3BJZ2 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdhr4H3BJZ2 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.24■□□□□ 0.03
Cdhr4H3BJZ2 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdhr4H3BJZ2 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cdhr4H3BJZ2 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdhr4H3BJZ2 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdhr4H3BJZ2 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cdhr4H3BJZ2 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdhr4H3BJZ2 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.24■□□□□ 0.03
Cdhr4H3BJZ2 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.24■□□□□ 0.03
Cdhr4H3BJZ2 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Cdhr4H3BJZ2 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdhr4H3BJZ2 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdhr4H3BJZ2 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdhr4H3BJZ2 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cdhr4H3BJZ2 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdhr4H3BJZ2 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cdhr4H3BJZ2 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cdhr4H3BJZ2 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdhr4H3BJZ2 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdhr4H3BJZ2 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdhr4H3BJZ2 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdhr4H3BJZ2 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdhr4H3BJZ2 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdhr4H3BJZ2 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdhr4H3BJZ2 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.23■□□□□ 0.03
Cdhr4H3BJZ2 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC15.23■□□□□ 0.03
Cdhr4H3BJZ2 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15.23■□□□□ 0.03
Cdhr4H3BJZ2 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdhr4H3BJZ2 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdhr4H3BJZ2 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdhr4H3BJZ2 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Cdhr4H3BJZ2 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdhr4H3BJZ2 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdhr4H3BJZ2 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdhr4H3BJZ2 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdhr4H3BJZ2 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdhr4H3BJZ2 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdhr4H3BJZ2 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms