Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.34■□□□□ 0.21
Colca2F8VPY8 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Colca2F8VPY8 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.34■□□□□ 0.21
Colca2F8VPY8 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Colca2F8VPY8 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.34■□□□□ 0.21
Colca2F8VPY8 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Colca2F8VPY8 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Colca2F8VPY8 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Colca2F8VPY8 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
Colca2F8VPY8 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.33■□□□□ 0.21
Colca2F8VPY8 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Colca2F8VPY8 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Colca2F8VPY8 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Colca2F8VPY8 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Colca2F8VPY8 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Colca2F8VPY8 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.33■□□□□ 0.2
Colca2F8VPY8 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.33■□□□□ 0.2
Colca2F8VPY8 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Colca2F8VPY8 Gm44450-201ENSMUST00000199528 114 ntBASIC16.33■□□□□ 0.2
Colca2F8VPY8 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Colca2F8VPY8 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Colca2F8VPY8 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Colca2F8VPY8 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Colca2F8VPY8 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Colca2F8VPY8 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Colca2F8VPY8 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Colca2F8VPY8 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Colca2F8VPY8 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Colca2F8VPY8 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Colca2F8VPY8 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Colca2F8VPY8 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Colca2F8VPY8 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Colca2F8VPY8 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Colca2F8VPY8 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Colca2F8VPY8 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.32■□□□□ 0.2
Colca2F8VPY8 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.32■□□□□ 0.2
Colca2F8VPY8 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Colca2F8VPY8 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Colca2F8VPY8 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Colca2F8VPY8 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Colca2F8VPY8 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Colca2F8VPY8 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Colca2F8VPY8 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Colca2F8VPY8 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Colca2F8VPY8 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Colca2F8VPY8 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Colca2F8VPY8 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Colca2F8VPY8 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Colca2F8VPY8 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Colca2F8VPY8 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Colca2F8VPY8 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Colca2F8VPY8 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Colca2F8VPY8 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.31■□□□□ 0.2
Colca2F8VPY8 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Colca2F8VPY8 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Colca2F8VPY8 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Colca2F8VPY8 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.31■□□□□ 0.2
Colca2F8VPY8 Mir5131-201ENSMUST00000175426 93 ntBASIC16.31■□□□□ 0.2
Colca2F8VPY8 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.31■□□□□ 0.2
Colca2F8VPY8 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.31■□□□□ 0.2
Colca2F8VPY8 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Colca2F8VPY8 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Colca2F8VPY8 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Colca2F8VPY8 Fst-202ENSMUST00000223640 2612 ntBASIC16.31■□□□□ 0.2
Colca2F8VPY8 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Colca2F8VPY8 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Colca2F8VPY8 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Colca2F8VPY8 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.3■□□□□ 0.2
Colca2F8VPY8 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Colca2F8VPY8 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Colca2F8VPY8 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Colca2F8VPY8 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.3■□□□□ 0.2
Colca2F8VPY8 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Colca2F8VPY8 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.3■□□□□ 0.2
Colca2F8VPY8 Gm8000-201ENSMUST00000188378 592 ntBASIC16.3■□□□□ 0.2
Colca2F8VPY8 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.3■□□□□ 0.2
Colca2F8VPY8 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.3■□□□□ 0.2
Colca2F8VPY8 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Colca2F8VPY8 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Colca2F8VPY8 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Colca2F8VPY8 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Colca2F8VPY8 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.3■□□□□ 0.2
Colca2F8VPY8 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Colca2F8VPY8 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Colca2F8VPY8 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Colca2F8VPY8 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Colca2F8VPY8 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Colca2F8VPY8 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Colca2F8VPY8 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Colca2F8VPY8 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Colca2F8VPY8 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Colca2F8VPY8 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Colca2F8VPY8 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Colca2F8VPY8 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Colca2F8VPY8 Gm44357-201ENSMUST00000195897 142 ntBASIC16.29■□□□□ 0.2
Colca2F8VPY8 Gm19658-201ENSMUST00000196231 138 ntBASIC16.29■□□□□ 0.2
Colca2F8VPY8 Gm44367-201ENSMUST00000196836 138 ntBASIC16.29■□□□□ 0.2
Colca2F8VPY8 Gm44350-201ENSMUST00000197197 138 ntBASIC16.29■□□□□ 0.2
Colca2F8VPY8 Gm44390-201ENSMUST00000197533 144 ntBASIC16.29■□□□□ 0.2
Colca2F8VPY8 Gm44313-201ENSMUST00000198018 138 ntBASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms