Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.49■□□□□ 0.07
Pcdh1F7BJK1 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh1F7BJK1 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.49■□□□□ 0.07
Pcdh1F7BJK1 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC15.49■□□□□ 0.07
Pcdh1F7BJK1 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh1F7BJK1 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh1F7BJK1 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
Pcdh1F7BJK1 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.49■□□□□ 0.07
Pcdh1F7BJK1 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Pcdh1F7BJK1 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh1F7BJK1 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Pcdh1F7BJK1 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Pcdh1F7BJK1 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Pcdh1F7BJK1 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh1F7BJK1 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh1F7BJK1 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh1F7BJK1 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh1F7BJK1 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC15.49■□□□□ 0.07
Pcdh1F7BJK1 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh1F7BJK1 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh1F7BJK1 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh1F7BJK1 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Pcdh1F7BJK1 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.48■□□□□ 0.07
Pcdh1F7BJK1 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh1F7BJK1 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Pcdh1F7BJK1 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh1F7BJK1 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Pcdh1F7BJK1 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Pcdh1F7BJK1 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh1F7BJK1 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC15.48■□□□□ 0.07
Pcdh1F7BJK1 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh1F7BJK1 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh1F7BJK1 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh1F7BJK1 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
Pcdh1F7BJK1 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh1F7BJK1 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh1F7BJK1 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Pcdh1F7BJK1 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh1F7BJK1 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh1F7BJK1 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh1F7BJK1 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Pcdh1F7BJK1 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh1F7BJK1 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Pcdh1F7BJK1 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh1F7BJK1 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
Pcdh1F7BJK1 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh1F7BJK1 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.48■□□□□ 0.07
Pcdh1F7BJK1 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Pcdh1F7BJK1 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh1F7BJK1 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh1F7BJK1 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh1F7BJK1 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh1F7BJK1 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh1F7BJK1 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.47■□□□□ 0.07
Pcdh1F7BJK1 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Pcdh1F7BJK1 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh1F7BJK1 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh1F7BJK1 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh1F7BJK1 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Pcdh1F7BJK1 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh1F7BJK1 Gm29241-201ENSMUST00000189260 1096 ntBASIC15.47■□□□□ 0.07
Pcdh1F7BJK1 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh1F7BJK1 Gm42555-201ENSMUST00000199304 1039 ntBASIC15.47■□□□□ 0.07
Pcdh1F7BJK1 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh1F7BJK1 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh1F7BJK1 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh1F7BJK1 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh1F7BJK1 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh1F7BJK1 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh1F7BJK1 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh1F7BJK1 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh1F7BJK1 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh1F7BJK1 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Pcdh1F7BJK1 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh1F7BJK1 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh1F7BJK1 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh1F7BJK1 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Pcdh1F7BJK1 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh1F7BJK1 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh1F7BJK1 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh1F7BJK1 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh1F7BJK1 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh1F7BJK1 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh1F7BJK1 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Pcdh1F7BJK1 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh1F7BJK1 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh1F7BJK1 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh1F7BJK1 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh1F7BJK1 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh1F7BJK1 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh1F7BJK1 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC15.46■□□□□ 0.07
Pcdh1F7BJK1 Gm11927-201ENSMUST00000118472 759 ntBASIC15.46■□□□□ 0.07
Pcdh1F7BJK1 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC15.46■□□□□ 0.07
Pcdh1F7BJK1 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC15.46■□□□□ 0.07
Pcdh1F7BJK1 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh1F7BJK1 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh1F7BJK1 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdh1F7BJK1 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdh1F7BJK1 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh1F7BJK1 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms