Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TprF6ZDS4 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TprF6ZDS4 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TprF6ZDS4 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TprF6ZDS4 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TprF6ZDS4 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TprF6ZDS4 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TprF6ZDS4 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC15.76■□□□□ 0.11
TprF6ZDS4 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
TprF6ZDS4 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.76■□□□□ 0.11
TprF6ZDS4 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TprF6ZDS4 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TprF6ZDS4 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TprF6ZDS4 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TprF6ZDS4 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
TprF6ZDS4 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TprF6ZDS4 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.76■□□□□ 0.11
TprF6ZDS4 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TprF6ZDS4 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
TprF6ZDS4 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TprF6ZDS4 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TprF6ZDS4 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TprF6ZDS4 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TprF6ZDS4 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
TprF6ZDS4 Gm8097-201ENSMUST00000117903 829 ntBASIC15.75■□□□□ 0.11
TprF6ZDS4 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TprF6ZDS4 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TprF6ZDS4 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TprF6ZDS4 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TprF6ZDS4 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TprF6ZDS4 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TprF6ZDS4 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TprF6ZDS4 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TprF6ZDS4 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
TprF6ZDS4 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TprF6ZDS4 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.75■□□□□ 0.11
TprF6ZDS4 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.75■□□□□ 0.11
TprF6ZDS4 Gm27742-201ENSMUST00000184667 60 ntBASIC15.75■□□□□ 0.11
TprF6ZDS4 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TprF6ZDS4 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TprF6ZDS4 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
TprF6ZDS4 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
TprF6ZDS4 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TprF6ZDS4 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TprF6ZDS4 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TprF6ZDS4 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TprF6ZDS4 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
TprF6ZDS4 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
TprF6ZDS4 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.74■□□□□ 0.11
TprF6ZDS4 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TprF6ZDS4 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TprF6ZDS4 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TprF6ZDS4 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TprF6ZDS4 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TprF6ZDS4 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TprF6ZDS4 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.74■□□□□ 0.11
TprF6ZDS4 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.74■□□□□ 0.11
TprF6ZDS4 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
TprF6ZDS4 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TprF6ZDS4 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TprF6ZDS4 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TprF6ZDS4 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TprF6ZDS4 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
TprF6ZDS4 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TprF6ZDS4 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TprF6ZDS4 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TprF6ZDS4 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TprF6ZDS4 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC15.73■□□□□ 0.11
TprF6ZDS4 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TprF6ZDS4 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TprF6ZDS4 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TprF6ZDS4 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TprF6ZDS4 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TprF6ZDS4 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TprF6ZDS4 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
TprF6ZDS4 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
TprF6ZDS4 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
TprF6ZDS4 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TprF6ZDS4 Gm37025-201ENSMUST00000195159 829 ntBASIC15.73■□□□□ 0.11
TprF6ZDS4 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TprF6ZDS4 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
TprF6ZDS4 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TprF6ZDS4 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TprF6ZDS4 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TprF6ZDS4 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TprF6ZDS4 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TprF6ZDS4 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TprF6ZDS4 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TprF6ZDS4 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TprF6ZDS4 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TprF6ZDS4 Gm23935-201ENSMUST00000102303 57 ntBASIC15.73■□□□□ 0.11
TprF6ZDS4 Gm24270-201ENSMUST00000102326 57 ntBASIC15.73■□□□□ 0.11
TprF6ZDS4 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TprF6ZDS4 Gm13884-201ENSMUST00000118103 829 ntBASIC15.73■□□□□ 0.11
TprF6ZDS4 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TprF6ZDS4 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TprF6ZDS4 Gm24245-201ENSMUST00000157318 57 ntBASIC15.73■□□□□ 0.11
TprF6ZDS4 Gm45328-201ENSMUST00000210942 917 ntBASIC15.73■□□□□ 0.11
TprF6ZDS4 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TprF6ZDS4 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms