Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dchs1E9PVD3 Gm43575-201ENSMUST00000196420 516 ntBASIC15.23■□□□□ 0.03
Dchs1E9PVD3 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC15.23■□□□□ 0.03
Dchs1E9PVD3 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.23■□□□□ 0.03
Dchs1E9PVD3 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dchs1E9PVD3 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.23■□□□□ 0.03
Dchs1E9PVD3 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dchs1E9PVD3 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dchs1E9PVD3 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.22■□□□□ 0.03
Dchs1E9PVD3 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.22■□□□□ 0.03
Dchs1E9PVD3 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Dchs1E9PVD3 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dchs1E9PVD3 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dchs1E9PVD3 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dchs1E9PVD3 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dchs1E9PVD3 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dchs1E9PVD3 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dchs1E9PVD3 Gm18195-201ENSMUST00000207604 706 ntBASIC15.22■□□□□ 0.03
Dchs1E9PVD3 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dchs1E9PVD3 Il3ra-202ENSMUST00000223589 738 ntBASIC15.22■□□□□ 0.03
Dchs1E9PVD3 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dchs1E9PVD3 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Dchs1E9PVD3 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dchs1E9PVD3 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Dchs1E9PVD3 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Dchs1E9PVD3 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dchs1E9PVD3 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dchs1E9PVD3 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Dchs1E9PVD3 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dchs1E9PVD3 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Dchs1E9PVD3 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.21■□□□□ 0.03
Dchs1E9PVD3 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Dchs1E9PVD3 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Dchs1E9PVD3 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.21■□□□□ 0.03
Dchs1E9PVD3 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Dchs1E9PVD3 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Dchs1E9PVD3 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Dchs1E9PVD3 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Dchs1E9PVD3 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Dchs1E9PVD3 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Dchs1E9PVD3 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Dchs1E9PVD3 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Dchs1E9PVD3 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Dchs1E9PVD3 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Dchs1E9PVD3 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Dchs1E9PVD3 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Dchs1E9PVD3 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Dchs1E9PVD3 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Dchs1E9PVD3 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Dchs1E9PVD3 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Dchs1E9PVD3 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.2■□□□□ 0.02
Dchs1E9PVD3 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Dchs1E9PVD3 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Dchs1E9PVD3 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Dchs1E9PVD3 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Dchs1E9PVD3 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.2■□□□□ 0.02
Dchs1E9PVD3 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Dchs1E9PVD3 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Dchs1E9PVD3 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Dchs1E9PVD3 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Dchs1E9PVD3 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Dchs1E9PVD3 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Dchs1E9PVD3 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Dchs1E9PVD3 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.19■□□□□ 0.02
Dchs1E9PVD3 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Dchs1E9PVD3 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Dchs1E9PVD3 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Dchs1E9PVD3 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Dchs1E9PVD3 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Dchs1E9PVD3 Auts2-212ENSMUST00000178555 309 ntBASIC15.19■□□□□ 0.02
Dchs1E9PVD3 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.19■□□□□ 0.02
Dchs1E9PVD3 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Dchs1E9PVD3 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Dchs1E9PVD3 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Dchs1E9PVD3 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Dchs1E9PVD3 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.19■□□□□ 0.02
Dchs1E9PVD3 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Dchs1E9PVD3 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.19■□□□□ 0.02
Dchs1E9PVD3 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Dchs1E9PVD3 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Dchs1E9PVD3 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Dchs1E9PVD3 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.18■□□□□ 0.02
Dchs1E9PVD3 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Dchs1E9PVD3 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Dchs1E9PVD3 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Dchs1E9PVD3 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.18■□□□□ 0.02
Dchs1E9PVD3 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.18■□□□□ 0.02
Dchs1E9PVD3 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Dchs1E9PVD3 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Dchs1E9PVD3 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.18■□□□□ 0.02
Dchs1E9PVD3 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Dchs1E9PVD3 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Dchs1E9PVD3 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Dchs1E9PVD3 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Dchs1E9PVD3 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Dchs1E9PVD3 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Dchs1E9PVD3 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Dchs1E9PVD3 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Dchs1E9PVD3 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Dchs1E9PVD3 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms