Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col6a5A6H584 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col6a5A6H584 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a5A6H584 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col6a5A6H584 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col6a5A6H584 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Col6a5A6H584 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a5A6H584 Gm8396-201ENSMUST00000057361 823 ntBASIC13□□□□□ -0.33
Col6a5A6H584 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Col6a5A6H584 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13□□□□□ -0.33
Col6a5A6H584 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC13□□□□□ -0.33
Col6a5A6H584 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a5A6H584 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a5A6H584 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a5A6H584 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a5A6H584 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a5A6H584 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Col6a5A6H584 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Col6a5A6H584 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC12.99□□□□□ -0.33
Col6a5A6H584 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a5A6H584 Gm20949-201ENSMUST00000206478 952 ntBASIC12.99□□□□□ -0.33
Col6a5A6H584 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.99□□□□□ -0.33
Col6a5A6H584 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a5A6H584 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a5A6H584 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a5A6H584 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Col6a5A6H584 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a5A6H584 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a5A6H584 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a5A6H584 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a5A6H584 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.99□□□□□ -0.33
Col6a5A6H584 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a5A6H584 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC12.99□□□□□ -0.33
Col6a5A6H584 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a5A6H584 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a5A6H584 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a5A6H584 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a5A6H584 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a5A6H584 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Col6a5A6H584 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a5A6H584 Gm18688-201ENSMUST00000204695 1859 ntBASIC12.98□□□□□ -0.33
Col6a5A6H584 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a5A6H584 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a5A6H584 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.98□□□□□ -0.33
Col6a5A6H584 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
Col6a5A6H584 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.98□□□□□ -0.33
Col6a5A6H584 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.98□□□□□ -0.33
Col6a5A6H584 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Col6a5A6H584 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a5A6H584 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Col6a5A6H584 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a5A6H584 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a5A6H584 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a5A6H584 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Col6a5A6H584 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a5A6H584 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a5A6H584 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a5A6H584 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.98□□□□□ -0.33
Col6a5A6H584 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Col6a5A6H584 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a5A6H584 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Col6a5A6H584 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a5A6H584 Gm18856-201ENSMUST00000178096 1374 ntBASIC12.98□□□□□ -0.33
Col6a5A6H584 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a5A6H584 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Col6a5A6H584 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a5A6H584 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.97□□□□□ -0.33
Col6a5A6H584 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Col6a5A6H584 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Col6a5A6H584 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a5A6H584 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a5A6H584 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a5A6H584 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Col6a5A6H584 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a5A6H584 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC12.97□□□□□ -0.33
Col6a5A6H584 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a5A6H584 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC12.97□□□□□ -0.33
Col6a5A6H584 Mir6977-201ENSMUST00000184960 64 ntBASIC12.97□□□□□ -0.33
Col6a5A6H584 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a5A6H584 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a5A6H584 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a5A6H584 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a5A6H584 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a5A6H584 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a5A6H584 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a5A6H584 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a5A6H584 Gm11424-201ENSMUST00000121929 829 ntBASIC12.96□□□□□ -0.33
Col6a5A6H584 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a5A6H584 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.96□□□□□ -0.33
Col6a5A6H584 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC12.96□□□□□ -0.33
Col6a5A6H584 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.96□□□□□ -0.33
Col6a5A6H584 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a5A6H584 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a5A6H584 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a5A6H584 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a5A6H584 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Col6a5A6H584 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a5A6H584 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC12.96□□□□□ -0.33
Col6a5A6H584 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.96□□□□□ -0.33
Col6a5A6H584 CT009713.7-201ENSMUST00000224689 571 ntBASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms