Protein–RNA interactions for Protein: A2AF28

Slc25a53, MCG115034, isoform CRA_c, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc25a53A2AF28 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc25a53A2AF28 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
Slc25a53A2AF28 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc25a53A2AF28 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Slc25a53A2AF28 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc25a53A2AF28 Gm23634-201ENSMUST00000175071 91 ntBASIC15.32■□□□□ 0.04
Slc25a53A2AF28 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Slc25a53A2AF28 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc25a53A2AF28 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc25a53A2AF28 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc25a53A2AF28 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Slc25a53A2AF28 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc25a53A2AF28 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc25a53A2AF28 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc25a53A2AF28 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Slc25a53A2AF28 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc25a53A2AF28 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc25a53A2AF28 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc25a53A2AF28 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc25a53A2AF28 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc25a53A2AF28 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc25a53A2AF28 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc25a53A2AF28 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Slc25a53A2AF28 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.31■□□□□ 0.04
Slc25a53A2AF28 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Slc25a53A2AF28 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Slc25a53A2AF28 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Slc25a53A2AF28 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.31■□□□□ 0.04
Slc25a53A2AF28 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Slc25a53A2AF28 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc25a53A2AF28 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc25a53A2AF28 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc25a53A2AF28 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc25a53A2AF28 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc25a53A2AF28 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.31■□□□□ 0.04
Slc25a53A2AF28 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc25a53A2AF28 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.31■□□□□ 0.04
Slc25a53A2AF28 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Slc25a53A2AF28 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc25a53A2AF28 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc25a53A2AF28 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc25a53A2AF28 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Slc25a53A2AF28 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC15.3■□□□□ 0.04
Slc25a53A2AF28 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc25a53A2AF28 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc25a53A2AF28 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc25a53A2AF28 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc25a53A2AF28 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Slc25a53A2AF28 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc25a53A2AF28 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc25a53A2AF28 AA414768-201ENSMUST00000121924 1257 ntBASIC15.3■□□□□ 0.04
Slc25a53A2AF28 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.3■□□□□ 0.04
Slc25a53A2AF28 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.3■□□□□ 0.04
Slc25a53A2AF28 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.3■□□□□ 0.04
Slc25a53A2AF28 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc25a53A2AF28 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc25a53A2AF28 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.3■□□□□ 0.04
Slc25a53A2AF28 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
Slc25a53A2AF28 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc25a53A2AF28 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc25a53A2AF28 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc25a53A2AF28 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc25a53A2AF28 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc25a53A2AF28 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc25a53A2AF28 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Slc25a53A2AF28 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Slc25a53A2AF28 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Slc25a53A2AF28 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Slc25a53A2AF28 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc25a53A2AF28 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc25a53A2AF28 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc25a53A2AF28 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.29■□□□□ 0.04
Slc25a53A2AF28 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Slc25a53A2AF28 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc25a53A2AF28 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc25a53A2AF28 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Slc25a53A2AF28 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Slc25a53A2AF28 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.29■□□□□ 0.04
Slc25a53A2AF28 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.29■□□□□ 0.04
Slc25a53A2AF28 Gm25016-201ENSMUST00000158399 131 ntBASIC15.29■□□□□ 0.04
Slc25a53A2AF28 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.29■□□□□ 0.04
Slc25a53A2AF28 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15.29■□□□□ 0.04
Slc25a53A2AF28 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Slc25a53A2AF28 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc25a53A2AF28 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc25a53A2AF28 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc25a53A2AF28 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Slc25a53A2AF28 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc25a53A2AF28 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc25a53A2AF28 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc25a53A2AF28 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Slc25a53A2AF28 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC15.28■□□□□ 0.04
Slc25a53A2AF28 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc25a53A2AF28 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc25a53A2AF28 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc25a53A2AF28 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc25a53A2AF28 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Slc25a53A2AF28 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc25a53A2AF28 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc25a53A2AF28 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms