Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smim17A0A504 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smim17A0A504 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smim17A0A504 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smim17A0A504 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smim17A0A504 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smim17A0A504 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Smim17A0A504 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smim17A0A504 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smim17A0A504 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smim17A0A504 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.66■□□□□ 0.1
Smim17A0A504 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smim17A0A504 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Smim17A0A504 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.66■□□□□ 0.1
Smim17A0A504 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smim17A0A504 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smim17A0A504 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.66■□□□□ 0.1
Smim17A0A504 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Smim17A0A504 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smim17A0A504 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Smim17A0A504 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smim17A0A504 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smim17A0A504 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.66■□□□□ 0.1
Smim17A0A504 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smim17A0A504 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Smim17A0A504 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smim17A0A504 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smim17A0A504 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smim17A0A504 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC15.65■□□□□ 0.1
Smim17A0A504 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smim17A0A504 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.65■□□□□ 0.1
Smim17A0A504 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smim17A0A504 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Smim17A0A504 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC15.65■□□□□ 0.1
Smim17A0A504 Gm26971-201ENSMUST00000182423 1072 ntBASIC15.65■□□□□ 0.1
Smim17A0A504 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smim17A0A504 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smim17A0A504 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smim17A0A504 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smim17A0A504 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smim17A0A504 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Smim17A0A504 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smim17A0A504 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Smim17A0A504 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smim17A0A504 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smim17A0A504 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Smim17A0A504 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smim17A0A504 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smim17A0A504 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smim17A0A504 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
Smim17A0A504 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smim17A0A504 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smim17A0A504 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smim17A0A504 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Smim17A0A504 Gm9207-201ENSMUST00000198773 1115 ntBASIC15.64■□□□□ 0.09
Smim17A0A504 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Smim17A0A504 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Smim17A0A504 Golgb1-201ENSMUST00000023534 498 ntBASIC15.64■□□□□ 0.09
Smim17A0A504 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smim17A0A504 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smim17A0A504 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Smim17A0A504 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smim17A0A504 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smim17A0A504 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Smim17A0A504 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Smim17A0A504 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smim17A0A504 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smim17A0A504 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smim17A0A504 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Smim17A0A504 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smim17A0A504 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smim17A0A504 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.63■□□□□ 0.09
Smim17A0A504 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smim17A0A504 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smim17A0A504 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Smim17A0A504 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smim17A0A504 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Smim17A0A504 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.63■□□□□ 0.09
Smim17A0A504 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smim17A0A504 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smim17A0A504 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Smim17A0A504 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smim17A0A504 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smim17A0A504 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smim17A0A504 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smim17A0A504 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Smim17A0A504 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smim17A0A504 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC15.63■□□□□ 0.09
Smim17A0A504 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smim17A0A504 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Smim17A0A504 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smim17A0A504 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smim17A0A504 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smim17A0A504 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smim17A0A504 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.62■□□□□ 0.09
Smim17A0A504 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smim17A0A504 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Smim17A0A504 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smim17A0A504 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC15.62■□□□□ 0.09
Smim17A0A504 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms