Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Trbv13-2A0A140T8N6 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trbv13-2A0A140T8N6 AC112142.1-201ENSMUST00000228796 918 ntBASIC12□□□□□ -0.49
Trbv13-2A0A140T8N6 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trbv13-2A0A140T8N6 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trbv13-2A0A140T8N6 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trbv13-2A0A140T8N6 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trbv13-2A0A140T8N6 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv13-2A0A140T8N6 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv13-2A0A140T8N6 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trbv13-2A0A140T8N6 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trbv13-2A0A140T8N6 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv13-2A0A140T8N6 CT010444.2-201ENSMUST00000217877 1629 ntBASIC12□□□□□ -0.49
Trbv13-2A0A140T8N6 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv13-2A0A140T8N6 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC12□□□□□ -0.49
Trbv13-2A0A140T8N6 AC125311.2-201ENSMUST00000227477 1940 ntBASIC11.99□□□□□ -0.49
Trbv13-2A0A140T8N6 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv13-2A0A140T8N6 Ddx41-204ENSMUST00000224765 2199 ntBASIC11.99□□□□□ -0.49
Trbv13-2A0A140T8N6 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv13-2A0A140T8N6 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv13-2A0A140T8N6 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trbv13-2A0A140T8N6 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv13-2A0A140T8N6 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv13-2A0A140T8N6 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv13-2A0A140T8N6 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv13-2A0A140T8N6 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv13-2A0A140T8N6 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv13-2A0A140T8N6 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv13-2A0A140T8N6 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC11.99□□□□□ -0.49
Trbv13-2A0A140T8N6 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv13-2A0A140T8N6 Gm22240-201ENSMUST00000175225 82 ntBASIC11.99□□□□□ -0.49
Trbv13-2A0A140T8N6 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv13-2A0A140T8N6 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC11.99□□□□□ -0.49
Trbv13-2A0A140T8N6 Gm9694-201ENSMUST00000193347 1189 ntBASIC11.99□□□□□ -0.49
Trbv13-2A0A140T8N6 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv13-2A0A140T8N6 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv13-2A0A140T8N6 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv13-2A0A140T8N6 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv13-2A0A140T8N6 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv13-2A0A140T8N6 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trbv13-2A0A140T8N6 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv13-2A0A140T8N6 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv13-2A0A140T8N6 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC11.99□□□□□ -0.49
Trbv13-2A0A140T8N6 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trbv13-2A0A140T8N6 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv13-2A0A140T8N6 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv13-2A0A140T8N6 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv13-2A0A140T8N6 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Trbv13-2A0A140T8N6 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv13-2A0A140T8N6 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv13-2A0A140T8N6 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv13-2A0A140T8N6 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv13-2A0A140T8N6 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC11.99□□□□□ -0.49
Trbv13-2A0A140T8N6 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC11.99□□□□□ -0.49
Trbv13-2A0A140T8N6 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv13-2A0A140T8N6 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv13-2A0A140T8N6 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv13-2A0A140T8N6 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trbv13-2A0A140T8N6 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv13-2A0A140T8N6 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv13-2A0A140T8N6 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv13-2A0A140T8N6 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trbv13-2A0A140T8N6 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trbv13-2A0A140T8N6 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv13-2A0A140T8N6 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv13-2A0A140T8N6 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Trbv13-2A0A140T8N6 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv13-2A0A140T8N6 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC11.98□□□□□ -0.49
Trbv13-2A0A140T8N6 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv13-2A0A140T8N6 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv13-2A0A140T8N6 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv13-2A0A140T8N6 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv13-2A0A140T8N6 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv13-2A0A140T8N6 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv13-2A0A140T8N6 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv13-2A0A140T8N6 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv13-2A0A140T8N6 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Trbv13-2A0A140T8N6 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trbv13-2A0A140T8N6 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv13-2A0A140T8N6 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Trbv13-2A0A140T8N6 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv13-2A0A140T8N6 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv13-2A0A140T8N6 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv13-2A0A140T8N6 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv13-2A0A140T8N6 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv13-2A0A140T8N6 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv13-2A0A140T8N6 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv13-2A0A140T8N6 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC11.97□□□□□ -0.49
Trbv13-2A0A140T8N6 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv13-2A0A140T8N6 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC11.97□□□□□ -0.49
Trbv13-2A0A140T8N6 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC11.97□□□□□ -0.49
Trbv13-2A0A140T8N6 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv13-2A0A140T8N6 AC154649.1-201ENSMUST00000227392 384 ntBASIC11.97□□□□□ -0.49
Trbv13-2A0A140T8N6 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv13-2A0A140T8N6 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv13-2A0A140T8N6 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trbv13-2A0A140T8N6 Gm10812-201ENSMUST00000099864 546 ntBASIC11.97□□□□□ -0.49
Trbv13-2A0A140T8N6 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv13-2A0A140T8N6 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trbv13-2A0A140T8N6 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms