Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv29A0A0G2LB96 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trbv29A0A0G2LB96 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv29A0A0G2LB96 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv29A0A0G2LB96 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv29A0A0G2LB96 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv29A0A0G2LB96 Gm15847-201ENSMUST00000121417 1065 ntBASIC14.31□□□□□ -0.12
Trbv29A0A0G2LB96 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv29A0A0G2LB96 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv29A0A0G2LB96 Mir6349-201ENSMUST00000184059 97 ntBASIC14.31□□□□□ -0.12
Trbv29A0A0G2LB96 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv29A0A0G2LB96 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trbv29A0A0G2LB96 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv29A0A0G2LB96 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trbv29A0A0G2LB96 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv29A0A0G2LB96 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv29A0A0G2LB96 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv29A0A0G2LB96 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv29A0A0G2LB96 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv29A0A0G2LB96 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv29A0A0G2LB96 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv29A0A0G2LB96 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv29A0A0G2LB96 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv29A0A0G2LB96 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv29A0A0G2LB96 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv29A0A0G2LB96 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Trbv29A0A0G2LB96 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Trbv29A0A0G2LB96 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.3□□□□□ -0.12
Trbv29A0A0G2LB96 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv29A0A0G2LB96 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trbv29A0A0G2LB96 Gm13148-201ENSMUST00000118892 745 ntBASIC14.3□□□□□ -0.12
Trbv29A0A0G2LB96 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv29A0A0G2LB96 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv29A0A0G2LB96 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv29A0A0G2LB96 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv29A0A0G2LB96 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC14.3□□□□□ -0.12
Trbv29A0A0G2LB96 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv29A0A0G2LB96 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.3□□□□□ -0.12
Trbv29A0A0G2LB96 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv29A0A0G2LB96 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trbv29A0A0G2LB96 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv29A0A0G2LB96 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trbv29A0A0G2LB96 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv29A0A0G2LB96 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv29A0A0G2LB96 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv29A0A0G2LB96 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv29A0A0G2LB96 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Trbv29A0A0G2LB96 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv29A0A0G2LB96 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.29□□□□□ -0.12
Trbv29A0A0G2LB96 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv29A0A0G2LB96 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Trbv29A0A0G2LB96 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC14.29□□□□□ -0.12
Trbv29A0A0G2LB96 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv29A0A0G2LB96 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC14.29□□□□□ -0.12
Trbv29A0A0G2LB96 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv29A0A0G2LB96 Gm26571-201ENSMUST00000181399 666 ntBASIC14.29□□□□□ -0.12
Trbv29A0A0G2LB96 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC14.29□□□□□ -0.12
Trbv29A0A0G2LB96 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC14.29□□□□□ -0.12
Trbv29A0A0G2LB96 Mtag2-201ENSMUST00000058665 714 ntBASIC14.29□□□□□ -0.12
Trbv29A0A0G2LB96 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv29A0A0G2LB96 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC14.29□□□□□ -0.12
Trbv29A0A0G2LB96 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv29A0A0G2LB96 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.29□□□□□ -0.12
Trbv29A0A0G2LB96 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.29□□□□□ -0.12
Trbv29A0A0G2LB96 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv29A0A0G2LB96 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.29□□□□□ -0.12
Trbv29A0A0G2LB96 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv29A0A0G2LB96 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv29A0A0G2LB96 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trbv29A0A0G2LB96 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv29A0A0G2LB96 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv29A0A0G2LB96 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv29A0A0G2LB96 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv29A0A0G2LB96 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv29A0A0G2LB96 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv29A0A0G2LB96 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trbv29A0A0G2LB96 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trbv29A0A0G2LB96 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv29A0A0G2LB96 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC14.28□□□□□ -0.12
Trbv29A0A0G2LB96 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC14.28□□□□□ -0.12
Trbv29A0A0G2LB96 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv29A0A0G2LB96 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv29A0A0G2LB96 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv29A0A0G2LB96 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv29A0A0G2LB96 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv29A0A0G2LB96 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv29A0A0G2LB96 Gm10654-201ENSMUST00000098653 1633 ntBASIC14.28□□□□□ -0.12
Trbv29A0A0G2LB96 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv29A0A0G2LB96 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv29A0A0G2LB96 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv29A0A0G2LB96 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv29A0A0G2LB96 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.27□□□□□ -0.12
Trbv29A0A0G2LB96 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Trbv29A0A0G2LB96 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv29A0A0G2LB96 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv29A0A0G2LB96 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Trbv29A0A0G2LB96 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv29A0A0G2LB96 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv29A0A0G2LB96 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC14.27□□□□□ -0.13
Trbv29A0A0G2LB96 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms