Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.11■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.11■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC15.1■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm18025-201ENSMUST00000221733 862 ntBASIC15.09■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC15.09■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.08■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC15.07■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm42545-201ENSMUST00000202755 922 ntBASIC15.07■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.07■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm13216-201ENSMUST00000117145 591 ntBASIC15.06■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC15.06■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 AC164629.5-201ENSMUST00000220387 632 ntBASIC15.06■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav15d-2-dv6d-2A0A0G2JGQ7 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms