Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9d-4A0A0G2JG37 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9d-4A0A0G2JG37 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9d-4A0A0G2JG37 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC11.85□□□□□ -0.51
Trav9d-4A0A0G2JG37 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9d-4A0A0G2JG37 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trav9d-4A0A0G2JG37 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9d-4A0A0G2JG37 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9d-4A0A0G2JG37 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9d-4A0A0G2JG37 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9d-4A0A0G2JG37 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav9d-4A0A0G2JG37 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9d-4A0A0G2JG37 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trav9d-4A0A0G2JG37 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9d-4A0A0G2JG37 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9d-4A0A0G2JG37 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Trav9d-4A0A0G2JG37 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trav9d-4A0A0G2JG37 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Trav9d-4A0A0G2JG37 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC11.84□□□□□ -0.51
Trav9d-4A0A0G2JG37 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9d-4A0A0G2JG37 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9d-4A0A0G2JG37 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9d-4A0A0G2JG37 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9d-4A0A0G2JG37 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trav9d-4A0A0G2JG37 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9d-4A0A0G2JG37 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Trav9d-4A0A0G2JG37 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9d-4A0A0G2JG37 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9d-4A0A0G2JG37 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9d-4A0A0G2JG37 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9d-4A0A0G2JG37 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9d-4A0A0G2JG37 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trav9d-4A0A0G2JG37 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trav9d-4A0A0G2JG37 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9d-4A0A0G2JG37 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9d-4A0A0G2JG37 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trav9d-4A0A0G2JG37 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav9d-4A0A0G2JG37 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav9d-4A0A0G2JG37 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9d-4A0A0G2JG37 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav9d-4A0A0G2JG37 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav9d-4A0A0G2JG37 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9d-4A0A0G2JG37 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9d-4A0A0G2JG37 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9d-4A0A0G2JG37 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9d-4A0A0G2JG37 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Trav9d-4A0A0G2JG37 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav9d-4A0A0G2JG37 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9d-4A0A0G2JG37 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trav9d-4A0A0G2JG37 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9d-4A0A0G2JG37 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trav9d-4A0A0G2JG37 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC11.83□□□□□ -0.52
Trav9d-4A0A0G2JG37 Gm14281-201ENSMUST00000121700 1294 ntBASIC11.83□□□□□ -0.52
Trav9d-4A0A0G2JG37 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9d-4A0A0G2JG37 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9d-4A0A0G2JG37 Cdc34b-202ENSMUST00000188741 1252 ntBASIC11.83□□□□□ -0.52
Trav9d-4A0A0G2JG37 Gm43017-201ENSMUST00000198296 752 ntBASIC11.83□□□□□ -0.52
Trav9d-4A0A0G2JG37 Gm43060-201ENSMUST00000200621 289 ntBASIC11.83□□□□□ -0.52
Trav9d-4A0A0G2JG37 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9d-4A0A0G2JG37 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trav9d-4A0A0G2JG37 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9d-4A0A0G2JG37 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9d-4A0A0G2JG37 Gm28265-201ENSMUST00000188201 2319 ntBASIC11.83□□□□□ -0.52
Trav9d-4A0A0G2JG37 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9d-4A0A0G2JG37 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9d-4A0A0G2JG37 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav9d-4A0A0G2JG37 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Trav9d-4A0A0G2JG37 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Trav9d-4A0A0G2JG37 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9d-4A0A0G2JG37 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav9d-4A0A0G2JG37 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-4A0A0G2JG37 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Trav9d-4A0A0G2JG37 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-4A0A0G2JG37 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-4A0A0G2JG37 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-4A0A0G2JG37 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-4A0A0G2JG37 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav9d-4A0A0G2JG37 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-4A0A0G2JG37 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-4A0A0G2JG37 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-4A0A0G2JG37 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-4A0A0G2JG37 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-4A0A0G2JG37 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav9d-4A0A0G2JG37 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-4A0A0G2JG37 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-4A0A0G2JG37 CT010467.1-202ENSMUST00000205406 714 ntBASIC11.82□□□□□ -0.52
Trav9d-4A0A0G2JG37 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC11.82□□□□□ -0.52
Trav9d-4A0A0G2JG37 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC11.82□□□□□ -0.52
Trav9d-4A0A0G2JG37 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC11.82□□□□□ -0.52
Trav9d-4A0A0G2JG37 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-4A0A0G2JG37 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC11.82□□□□□ -0.52
Trav9d-4A0A0G2JG37 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-4A0A0G2JG37 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-4A0A0G2JG37 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-4A0A0G2JG37 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-4A0A0G2JG37 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-4A0A0G2JG37 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-4A0A0G2JG37 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-4A0A0G2JG37 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-4A0A0G2JG37 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms