Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav3n-3A0A0G2JEM0 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Gm8309-201ENSMUST00000206627 1448 ntBASIC13.05□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav3n-3A0A0G2JEM0 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav3n-3A0A0G2JEM0 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC13.05□□□□□ -0.32
Trav3n-3A0A0G2JEM0 AC107452.1-201ENSMUST00000227963 481 ntBASIC13.05□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3n-3A0A0G2JEM0 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC13.04□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC13.04□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC13.04□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3n-3A0A0G2JEM0 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav3n-3A0A0G2JEM0 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Gm43017-201ENSMUST00000198296 752 ntBASIC13.03□□□□□ -0.32
Trav3n-3A0A0G2JEM0 AC160393.1-201ENSMUST00000218378 1279 ntBASIC13.03□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC13.03□□□□□ -0.32
Trav3n-3A0A0G2JEM0 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC13.03□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms