Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv5A0A0B4J1G9 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv5A0A0B4J1G9 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv5A0A0B4J1G9 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv5A0A0B4J1G9 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv5A0A0B4J1G9 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv5A0A0B4J1G9 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Trbv5A0A0B4J1G9 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv5A0A0B4J1G9 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv5A0A0B4J1G9 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv5A0A0B4J1G9 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC13.9□□□□□ -0.18
Trbv5A0A0B4J1G9 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Trbv5A0A0B4J1G9 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
Trbv5A0A0B4J1G9 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv5A0A0B4J1G9 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv5A0A0B4J1G9 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv5A0A0B4J1G9 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv5A0A0B4J1G9 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv5A0A0B4J1G9 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trbv5A0A0B4J1G9 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv5A0A0B4J1G9 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv5A0A0B4J1G9 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv5A0A0B4J1G9 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC13.89□□□□□ -0.19
Trbv5A0A0B4J1G9 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv5A0A0B4J1G9 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv5A0A0B4J1G9 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv5A0A0B4J1G9 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trbv5A0A0B4J1G9 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv5A0A0B4J1G9 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv5A0A0B4J1G9 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.89□□□□□ -0.19
Trbv5A0A0B4J1G9 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC13.89□□□□□ -0.19
Trbv5A0A0B4J1G9 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv5A0A0B4J1G9 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv5A0A0B4J1G9 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.89□□□□□ -0.19
Trbv5A0A0B4J1G9 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trbv5A0A0B4J1G9 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC13.89□□□□□ -0.19
Trbv5A0A0B4J1G9 CT010467.1-202ENSMUST00000205406 714 ntBASIC13.89□□□□□ -0.19
Trbv5A0A0B4J1G9 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv5A0A0B4J1G9 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv5A0A0B4J1G9 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trbv5A0A0B4J1G9 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv5A0A0B4J1G9 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv5A0A0B4J1G9 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv5A0A0B4J1G9 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.89□□□□□ -0.19
Trbv5A0A0B4J1G9 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv5A0A0B4J1G9 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv5A0A0B4J1G9 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv5A0A0B4J1G9 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv5A0A0B4J1G9 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv5A0A0B4J1G9 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv5A0A0B4J1G9 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv5A0A0B4J1G9 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv5A0A0B4J1G9 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv5A0A0B4J1G9 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv5A0A0B4J1G9 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv5A0A0B4J1G9 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv5A0A0B4J1G9 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv5A0A0B4J1G9 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv5A0A0B4J1G9 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Trbv5A0A0B4J1G9 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv5A0A0B4J1G9 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv5A0A0B4J1G9 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv5A0A0B4J1G9 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC13.88□□□□□ -0.19
Trbv5A0A0B4J1G9 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv5A0A0B4J1G9 AC140930.3-201ENSMUST00000222935 274 ntBASIC13.88□□□□□ -0.19
Trbv5A0A0B4J1G9 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv5A0A0B4J1G9 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trbv5A0A0B4J1G9 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trbv5A0A0B4J1G9 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trbv5A0A0B4J1G9 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv5A0A0B4J1G9 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv5A0A0B4J1G9 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.88□□□□□ -0.19
Trbv5A0A0B4J1G9 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv5A0A0B4J1G9 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC13.88□□□□□ -0.19
Trbv5A0A0B4J1G9 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv5A0A0B4J1G9 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv5A0A0B4J1G9 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv5A0A0B4J1G9 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv5A0A0B4J1G9 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.88□□□□□ -0.19
Trbv5A0A0B4J1G9 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv5A0A0B4J1G9 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv5A0A0B4J1G9 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Trbv5A0A0B4J1G9 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv5A0A0B4J1G9 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv5A0A0B4J1G9 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Trbv5A0A0B4J1G9 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv5A0A0B4J1G9 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.87□□□□□ -0.19
Trbv5A0A0B4J1G9 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.87□□□□□ -0.19
Trbv5A0A0B4J1G9 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv5A0A0B4J1G9 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv5A0A0B4J1G9 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.87□□□□□ -0.19
Trbv5A0A0B4J1G9 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv5A0A0B4J1G9 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv5A0A0B4J1G9 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv5A0A0B4J1G9 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv5A0A0B4J1G9 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Trbv5A0A0B4J1G9 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv5A0A0B4J1G9 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv5A0A0B4J1G9 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC13.87□□□□□ -0.19
Trbv5A0A0B4J1G9 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms