Protein–RNA interactions for Protein: A0A0A6YXN8

Sirpb1b, Signal-regulatory protein beta 1B, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1bA0A0A6YXN8 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sirpb1bA0A0A6YXN8 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sirpb1bA0A0A6YXN8 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sirpb1bA0A0A6YXN8 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sirpb1bA0A0A6YXN8 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Sirpb1bA0A0A6YXN8 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Sirpb1bA0A0A6YXN8 Gm10167-201ENSMUST00000150411 1479 ntBASIC15.22■□□□□ 0.03
Sirpb1bA0A0A6YXN8 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.22■□□□□ 0.03
Sirpb1bA0A0A6YXN8 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sirpb1bA0A0A6YXN8 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sirpb1bA0A0A6YXN8 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Sirpb1bA0A0A6YXN8 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sirpb1bA0A0A6YXN8 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sirpb1bA0A0A6YXN8 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.22■□□□□ 0.03
Sirpb1bA0A0A6YXN8 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sirpb1bA0A0A6YXN8 Gm29994-201ENSMUST00000195495 1193 ntBASIC15.22■□□□□ 0.03
Sirpb1bA0A0A6YXN8 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Sirpb1bA0A0A6YXN8 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.22■□□□□ 0.03
Sirpb1bA0A0A6YXN8 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sirpb1bA0A0A6YXN8 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sirpb1bA0A0A6YXN8 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sirpb1bA0A0A6YXN8 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sirpb1bA0A0A6YXN8 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sirpb1bA0A0A6YXN8 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.22■□□□□ 0.03
Sirpb1bA0A0A6YXN8 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sirpb1bA0A0A6YXN8 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sirpb1bA0A0A6YXN8 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Sirpb1bA0A0A6YXN8 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sirpb1bA0A0A6YXN8 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.21■□□□□ 0.03
Sirpb1bA0A0A6YXN8 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sirpb1bA0A0A6YXN8 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sirpb1bA0A0A6YXN8 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sirpb1bA0A0A6YXN8 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sirpb1bA0A0A6YXN8 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sirpb1bA0A0A6YXN8 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sirpb1bA0A0A6YXN8 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sirpb1bA0A0A6YXN8 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC15.21■□□□□ 0.03
Sirpb1bA0A0A6YXN8 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Sirpb1bA0A0A6YXN8 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sirpb1bA0A0A6YXN8 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC15.21■□□□□ 0.03
Sirpb1bA0A0A6YXN8 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Sirpb1bA0A0A6YXN8 AC140264.2-202ENSMUST00000218746 817 ntBASIC15.21■□□□□ 0.03
Sirpb1bA0A0A6YXN8 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sirpb1bA0A0A6YXN8 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sirpb1bA0A0A6YXN8 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sirpb1bA0A0A6YXN8 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sirpb1bA0A0A6YXN8 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sirpb1bA0A0A6YXN8 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Sirpb1bA0A0A6YXN8 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Sirpb1bA0A0A6YXN8 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sirpb1bA0A0A6YXN8 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sirpb1bA0A0A6YXN8 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sirpb1bA0A0A6YXN8 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.21■□□□□ 0.02
Sirpb1bA0A0A6YXN8 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Sirpb1bA0A0A6YXN8 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sirpb1bA0A0A6YXN8 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sirpb1bA0A0A6YXN8 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sirpb1bA0A0A6YXN8 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sirpb1bA0A0A6YXN8 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sirpb1bA0A0A6YXN8 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sirpb1bA0A0A6YXN8 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Sirpb1bA0A0A6YXN8 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sirpb1bA0A0A6YXN8 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sirpb1bA0A0A6YXN8 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sirpb1bA0A0A6YXN8 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sirpb1bA0A0A6YXN8 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Sirpb1bA0A0A6YXN8 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sirpb1bA0A0A6YXN8 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Sirpb1bA0A0A6YXN8 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Sirpb1bA0A0A6YXN8 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Sirpb1bA0A0A6YXN8 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.2■□□□□ 0.02
Sirpb1bA0A0A6YXN8 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sirpb1bA0A0A6YXN8 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Sirpb1bA0A0A6YXN8 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Sirpb1bA0A0A6YXN8 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Sirpb1bA0A0A6YXN8 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC15.2■□□□□ 0.02
Sirpb1bA0A0A6YXN8 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sirpb1bA0A0A6YXN8 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sirpb1bA0A0A6YXN8 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Sirpb1bA0A0A6YXN8 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sirpb1bA0A0A6YXN8 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sirpb1bA0A0A6YXN8 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sirpb1bA0A0A6YXN8 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sirpb1bA0A0A6YXN8 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sirpb1bA0A0A6YXN8 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Sirpb1bA0A0A6YXN8 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Sirpb1bA0A0A6YXN8 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sirpb1bA0A0A6YXN8 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sirpb1bA0A0A6YXN8 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sirpb1bA0A0A6YXN8 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sirpb1bA0A0A6YXN8 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Sirpb1bA0A0A6YXN8 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sirpb1bA0A0A6YXN8 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sirpb1bA0A0A6YXN8 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sirpb1bA0A0A6YXN8 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Sirpb1bA0A0A6YXN8 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.19■□□□□ 0.02
Sirpb1bA0A0A6YXN8 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sirpb1bA0A0A6YXN8 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Sirpb1bA0A0A6YXN8 Mir1199-201ENSMUST00000117015 119 ntBASIC15.19■□□□□ 0.02
Sirpb1bA0A0A6YXN8 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms