Protein–RNA interactions for Protein: A0A0A6YXC3

Ighv1-52, Immunoglobulin heavy variable 1-52 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-52A0A0A6YXC3 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Ighv1-52A0A0A6YXC3 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC13.1□□□□□ -0.31
Ighv1-52A0A0A6YXC3 Otx2os1-204ENSMUST00000227221 751 ntBASIC13.1□□□□□ -0.31
Ighv1-52A0A0A6YXC3 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-52A0A0A6YXC3 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-52A0A0A6YXC3 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-52A0A0A6YXC3 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-52A0A0A6YXC3 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC13.1□□□□□ -0.31
Ighv1-52A0A0A6YXC3 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ighv1-52A0A0A6YXC3 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-52A0A0A6YXC3 Ddx41-204ENSMUST00000224765 2199 ntBASIC13.1□□□□□ -0.31
Ighv1-52A0A0A6YXC3 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-52A0A0A6YXC3 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC13.1□□□□□ -0.31
Ighv1-52A0A0A6YXC3 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-52A0A0A6YXC3 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-52A0A0A6YXC3 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC13.09□□□□□ -0.31
Ighv1-52A0A0A6YXC3 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Ighv1-52A0A0A6YXC3 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-52A0A0A6YXC3 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-52A0A0A6YXC3 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ighv1-52A0A0A6YXC3 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-52A0A0A6YXC3 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-52A0A0A6YXC3 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-52A0A0A6YXC3 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-52A0A0A6YXC3 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-52A0A0A6YXC3 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-52A0A0A6YXC3 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-52A0A0A6YXC3 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-52A0A0A6YXC3 Gm17661-201ENSMUST00000170317 270 ntBASIC13.09□□□□□ -0.31
Ighv1-52A0A0A6YXC3 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC13.09□□□□□ -0.31
Ighv1-52A0A0A6YXC3 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-52A0A0A6YXC3 Gm37055-201ENSMUST00000191866 133 ntBASIC13.09□□□□□ -0.31
Ighv1-52A0A0A6YXC3 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-52A0A0A6YXC3 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-52A0A0A6YXC3 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC13.09□□□□□ -0.31
Ighv1-52A0A0A6YXC3 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC13.09□□□□□ -0.31
Ighv1-52A0A0A6YXC3 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-52A0A0A6YXC3 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-52A0A0A6YXC3 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-52A0A0A6YXC3 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-52A0A0A6YXC3 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-52A0A0A6YXC3 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-52A0A0A6YXC3 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Ighv1-52A0A0A6YXC3 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-52A0A0A6YXC3 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ighv1-52A0A0A6YXC3 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-52A0A0A6YXC3 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-52A0A0A6YXC3 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-52A0A0A6YXC3 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-52A0A0A6YXC3 Gm37811-201ENSMUST00000192416 2601 ntBASIC13.09□□□□□ -0.31
Ighv1-52A0A0A6YXC3 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ighv1-52A0A0A6YXC3 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC13.08□□□□□ -0.31
Ighv1-52A0A0A6YXC3 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.31
Ighv1-52A0A0A6YXC3 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC13.08□□□□□ -0.32
Ighv1-52A0A0A6YXC3 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC13.08□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Ighv1-52A0A0A6YXC3 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Ighv1-52A0A0A6YXC3 AL672049.1-201ENSMUST00000197943 91 ntBASIC13.08□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Gm9731-201ENSMUST00000209480 747 ntBASIC13.08□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Gm10252-201ENSMUST00000209541 832 ntBASIC13.08□□□□□ -0.32
Ighv1-52A0A0A6YXC3 AC135963.1-201ENSMUST00000211640 717 ntBASIC13.08□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Gm5417-201ENSMUST00000079706 384 ntBASIC13.08□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC13.08□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC13.07□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Gm7638-201ENSMUST00000121348 967 ntBASIC13.07□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Gm27463-201ENSMUST00000183569 57 ntBASIC13.07□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC13.07□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms