Protein–RNA interactions for Protein: A0A0A6YX19

Ighv6-4, Immunoglobulin heavy variable V6-4 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv6-4A0A0A6YX19 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ighv6-4A0A0A6YX19 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.7□□□□□ -0.22
Ighv6-4A0A0A6YX19 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ighv6-4A0A0A6YX19 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.7□□□□□ -0.22
Ighv6-4A0A0A6YX19 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ighv6-4A0A0A6YX19 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ighv6-4A0A0A6YX19 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ighv6-4A0A0A6YX19 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ighv6-4A0A0A6YX19 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.7□□□□□ -0.22
Ighv6-4A0A0A6YX19 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Ighv6-4A0A0A6YX19 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ighv6-4A0A0A6YX19 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ighv6-4A0A0A6YX19 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ighv6-4A0A0A6YX19 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Ighv6-4A0A0A6YX19 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv6-4A0A0A6YX19 Gm16499-203ENSMUST00000204633 2177 ntBASIC13.69□□□□□ -0.22
Ighv6-4A0A0A6YX19 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv6-4A0A0A6YX19 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv6-4A0A0A6YX19 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv6-4A0A0A6YX19 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv6-4A0A0A6YX19 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv6-4A0A0A6YX19 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.69□□□□□ -0.22
Ighv6-4A0A0A6YX19 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Ighv6-4A0A0A6YX19 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv6-4A0A0A6YX19 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv6-4A0A0A6YX19 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv6-4A0A0A6YX19 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC13.69□□□□□ -0.22
Ighv6-4A0A0A6YX19 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC13.69□□□□□ -0.22
Ighv6-4A0A0A6YX19 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv6-4A0A0A6YX19 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv6-4A0A0A6YX19 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv6-4A0A0A6YX19 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv6-4A0A0A6YX19 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv6-4A0A0A6YX19 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv6-4A0A0A6YX19 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv6-4A0A0A6YX19 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv6-4A0A0A6YX19 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Ighv6-4A0A0A6YX19 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Ighv6-4A0A0A6YX19 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv6-4A0A0A6YX19 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv6-4A0A0A6YX19 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Ighv6-4A0A0A6YX19 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv6-4A0A0A6YX19 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv6-4A0A0A6YX19 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv6-4A0A0A6YX19 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv6-4A0A0A6YX19 AC125311.2-201ENSMUST00000227477 1940 ntBASIC13.68□□□□□ -0.22
Ighv6-4A0A0A6YX19 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv6-4A0A0A6YX19 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv6-4A0A0A6YX19 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv6-4A0A0A6YX19 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv6-4A0A0A6YX19 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv6-4A0A0A6YX19 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv6-4A0A0A6YX19 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv6-4A0A0A6YX19 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv6-4A0A0A6YX19 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv6-4A0A0A6YX19 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv6-4A0A0A6YX19 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC13.68□□□□□ -0.22
Ighv6-4A0A0A6YX19 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv6-4A0A0A6YX19 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv6-4A0A0A6YX19 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv6-4A0A0A6YX19 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv6-4A0A0A6YX19 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv6-4A0A0A6YX19 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv6-4A0A0A6YX19 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv6-4A0A0A6YX19 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ighv6-4A0A0A6YX19 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Ighv6-4A0A0A6YX19 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv6-4A0A0A6YX19 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv6-4A0A0A6YX19 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv6-4A0A0A6YX19 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv6-4A0A0A6YX19 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv6-4A0A0A6YX19 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv6-4A0A0A6YX19 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv6-4A0A0A6YX19 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.67□□□□□ -0.22
Ighv6-4A0A0A6YX19 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv6-4A0A0A6YX19 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv6-4A0A0A6YX19 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.67□□□□□ -0.22
Ighv6-4A0A0A6YX19 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv6-4A0A0A6YX19 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv6-4A0A0A6YX19 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv6-4A0A0A6YX19 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv6-4A0A0A6YX19 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.67□□□□□ -0.22
Ighv6-4A0A0A6YX19 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv6-4A0A0A6YX19 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv6-4A0A0A6YX19 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv6-4A0A0A6YX19 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv6-4A0A0A6YX19 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Ighv6-4A0A0A6YX19 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC13.67□□□□□ -0.22
Ighv6-4A0A0A6YX19 CT030146.1-201ENSMUST00000220919 217 ntBASIC13.67□□□□□ -0.22
Ighv6-4A0A0A6YX19 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Ighv6-4A0A0A6YX19 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv6-4A0A0A6YX19 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ighv6-4A0A0A6YX19 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ighv6-4A0A0A6YX19 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv6-4A0A0A6YX19 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv6-4A0A0A6YX19 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv6-4A0A0A6YX19 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv6-4A0A0A6YX19 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv6-4A0A0A6YX19 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ighv6-4A0A0A6YX19 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms