Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6d-5A0A075B6B9 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6d-5A0A075B6B9 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6d-5A0A075B6B9 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Trav6d-5A0A075B6B9 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6d-5A0A075B6B9 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6d-5A0A075B6B9 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6d-5A0A075B6B9 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6d-5A0A075B6B9 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC13.91□□□□□ -0.18
Trav6d-5A0A075B6B9 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6d-5A0A075B6B9 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6d-5A0A075B6B9 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6d-5A0A075B6B9 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6d-5A0A075B6B9 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6d-5A0A075B6B9 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6d-5A0A075B6B9 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6d-5A0A075B6B9 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC13.91□□□□□ -0.18
Trav6d-5A0A075B6B9 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6d-5A0A075B6B9 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trav6d-5A0A075B6B9 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6d-5A0A075B6B9 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6d-5A0A075B6B9 Gm42778-201ENSMUST00000199644 553 ntBASIC13.91□□□□□ -0.18
Trav6d-5A0A075B6B9 Gm21168-201ENSMUST00000199646 1096 ntBASIC13.91□□□□□ -0.18
Trav6d-5A0A075B6B9 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6d-5A0A075B6B9 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6d-5A0A075B6B9 Zfp783-201ENSMUST00000095946 670 ntBASIC13.91□□□□□ -0.18
Trav6d-5A0A075B6B9 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6d-5A0A075B6B9 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.91□□□□□ -0.18
Trav6d-5A0A075B6B9 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trav6d-5A0A075B6B9 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6d-5A0A075B6B9 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6d-5A0A075B6B9 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6d-5A0A075B6B9 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6d-5A0A075B6B9 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6d-5A0A075B6B9 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6d-5A0A075B6B9 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav6d-5A0A075B6B9 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6d-5A0A075B6B9 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6d-5A0A075B6B9 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trav6d-5A0A075B6B9 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6d-5A0A075B6B9 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC13.9□□□□□ -0.18
Trav6d-5A0A075B6B9 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6d-5A0A075B6B9 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6d-5A0A075B6B9 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC13.9□□□□□ -0.18
Trav6d-5A0A075B6B9 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6d-5A0A075B6B9 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav6d-5A0A075B6B9 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6d-5A0A075B6B9 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6d-5A0A075B6B9 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6d-5A0A075B6B9 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6d-5A0A075B6B9 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
Trav6d-5A0A075B6B9 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6d-5A0A075B6B9 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6d-5A0A075B6B9 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6d-5A0A075B6B9 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6d-5A0A075B6B9 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trav6d-5A0A075B6B9 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6d-5A0A075B6B9 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6d-5A0A075B6B9 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6d-5A0A075B6B9 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6d-5A0A075B6B9 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trav6d-5A0A075B6B9 Gm13509-201ENSMUST00000119733 1308 ntBASIC13.9□□□□□ -0.19
Trav6d-5A0A075B6B9 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trav6d-5A0A075B6B9 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-5A0A075B6B9 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-5A0A075B6B9 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-5A0A075B6B9 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-5A0A075B6B9 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-5A0A075B6B9 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-5A0A075B6B9 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-5A0A075B6B9 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-5A0A075B6B9 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-5A0A075B6B9 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trav6d-5A0A075B6B9 Gm2399-201ENSMUST00000104944 225 ntBASIC13.89□□□□□ -0.19
Trav6d-5A0A075B6B9 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-5A0A075B6B9 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-5A0A075B6B9 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Trav6d-5A0A075B6B9 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Trav6d-5A0A075B6B9 Ap3s1-204ENSMUST00000225520 957 ntBASIC13.89□□□□□ -0.19
Trav6d-5A0A075B6B9 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-5A0A075B6B9 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-5A0A075B6B9 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav6d-5A0A075B6B9 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-5A0A075B6B9 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-5A0A075B6B9 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-5A0A075B6B9 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-5A0A075B6B9 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-5A0A075B6B9 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav6d-5A0A075B6B9 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-5A0A075B6B9 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-5A0A075B6B9 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-5A0A075B6B9 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-5A0A075B6B9 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-5A0A075B6B9 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-5A0A075B6B9 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-5A0A075B6B9 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6d-5A0A075B6B9 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6d-5A0A075B6B9 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trav6d-5A0A075B6B9 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6d-5A0A075B6B9 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms