Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav12d-3A0A075B6A4 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav12d-3A0A075B6A4 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav12d-3A0A075B6A4 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav12d-3A0A075B6A4 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav12d-3A0A075B6A4 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav12d-3A0A075B6A4 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC12.9□□□□□ -0.34
Trav12d-3A0A075B6A4 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav12d-3A0A075B6A4 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC12.9□□□□□ -0.34
Trav12d-3A0A075B6A4 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav12d-3A0A075B6A4 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav12d-3A0A075B6A4 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav12d-3A0A075B6A4 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav12d-3A0A075B6A4 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav12d-3A0A075B6A4 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav12d-3A0A075B6A4 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav12d-3A0A075B6A4 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav12d-3A0A075B6A4 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Trav12d-3A0A075B6A4 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav12d-3A0A075B6A4 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trav12d-3A0A075B6A4 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav12d-3A0A075B6A4 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav12d-3A0A075B6A4 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav12d-3A0A075B6A4 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav12d-3A0A075B6A4 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav12d-3A0A075B6A4 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav12d-3A0A075B6A4 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav12d-3A0A075B6A4 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav12d-3A0A075B6A4 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav12d-3A0A075B6A4 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav12d-3A0A075B6A4 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav12d-3A0A075B6A4 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC12.89□□□□□ -0.35
Trav12d-3A0A075B6A4 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav12d-3A0A075B6A4 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav12d-3A0A075B6A4 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav12d-3A0A075B6A4 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trav12d-3A0A075B6A4 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav12d-3A0A075B6A4 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav12d-3A0A075B6A4 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Trav12d-3A0A075B6A4 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav12d-3A0A075B6A4 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav12d-3A0A075B6A4 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav12d-3A0A075B6A4 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav12d-3A0A075B6A4 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav12d-3A0A075B6A4 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav12d-3A0A075B6A4 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav12d-3A0A075B6A4 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav12d-3A0A075B6A4 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav12d-3A0A075B6A4 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav12d-3A0A075B6A4 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav12d-3A0A075B6A4 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav12d-3A0A075B6A4 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav12d-3A0A075B6A4 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav12d-3A0A075B6A4 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Trav12d-3A0A075B6A4 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav12d-3A0A075B6A4 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trav12d-3A0A075B6A4 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav12d-3A0A075B6A4 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav12d-3A0A075B6A4 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC12.88□□□□□ -0.35
Trav12d-3A0A075B6A4 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav12d-3A0A075B6A4 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav12d-3A0A075B6A4 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav12d-3A0A075B6A4 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trav12d-3A0A075B6A4 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav12d-3A0A075B6A4 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC12.88□□□□□ -0.35
Trav12d-3A0A075B6A4 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav12d-3A0A075B6A4 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav12d-3A0A075B6A4 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav12d-3A0A075B6A4 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Trav12d-3A0A075B6A4 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12d-3A0A075B6A4 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12d-3A0A075B6A4 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12d-3A0A075B6A4 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12d-3A0A075B6A4 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav12d-3A0A075B6A4 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12d-3A0A075B6A4 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12d-3A0A075B6A4 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Trav12d-3A0A075B6A4 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12d-3A0A075B6A4 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12d-3A0A075B6A4 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC12.87□□□□□ -0.35
Trav12d-3A0A075B6A4 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Trav12d-3A0A075B6A4 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC12.87□□□□□ -0.35
Trav12d-3A0A075B6A4 Gm27801-201ENSMUST00000184174 223 ntBASIC12.87□□□□□ -0.35
Trav12d-3A0A075B6A4 AC137127.1-201ENSMUST00000213466 1078 ntBASIC12.87□□□□□ -0.35
Trav12d-3A0A075B6A4 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC12.87□□□□□ -0.35
Trav12d-3A0A075B6A4 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12d-3A0A075B6A4 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trav12d-3A0A075B6A4 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trav12d-3A0A075B6A4 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trav12d-3A0A075B6A4 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12d-3A0A075B6A4 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12d-3A0A075B6A4 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12d-3A0A075B6A4 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12d-3A0A075B6A4 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav12d-3A0A075B6A4 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12d-3A0A075B6A4 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12d-3A0A075B6A4 AC165080.2-201ENSMUST00000217491 1530 ntBASIC12.87□□□□□ -0.35
Trav12d-3A0A075B6A4 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12d-3A0A075B6A4 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav12d-3A0A075B6A4 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms