Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9d-1A0A075B699 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9d-1A0A075B699 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trav9d-1A0A075B699 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9d-1A0A075B699 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC13.31□□□□□ -0.28
Trav9d-1A0A075B699 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trav9d-1A0A075B699 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9d-1A0A075B699 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9d-1A0A075B699 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9d-1A0A075B699 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9d-1A0A075B699 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav9d-1A0A075B699 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC13.31□□□□□ -0.28
Trav9d-1A0A075B699 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9d-1A0A075B699 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9d-1A0A075B699 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9d-1A0A075B699 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav9d-1A0A075B699 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9d-1A0A075B699 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9d-1A0A075B699 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9d-1A0A075B699 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9d-1A0A075B699 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9d-1A0A075B699 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Trav9d-1A0A075B699 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9d-1A0A075B699 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9d-1A0A075B699 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9d-1A0A075B699 Gm10418-201ENSMUST00000100943 576 ntBASIC13.3□□□□□ -0.28
Trav9d-1A0A075B699 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trav9d-1A0A075B699 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC13.3□□□□□ -0.28
Trav9d-1A0A075B699 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9d-1A0A075B699 AC122769.4-201ENSMUST00000228166 901 ntBASIC13.3□□□□□ -0.28
Trav9d-1A0A075B699 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9d-1A0A075B699 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9d-1A0A075B699 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9d-1A0A075B699 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
Trav9d-1A0A075B699 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9d-1A0A075B699 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9d-1A0A075B699 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9d-1A0A075B699 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Trav9d-1A0A075B699 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trav9d-1A0A075B699 Gm16499-203ENSMUST00000204633 2177 ntBASIC13.3□□□□□ -0.28
Trav9d-1A0A075B699 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-1A0A075B699 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trav9d-1A0A075B699 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-1A0A075B699 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-1A0A075B699 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trav9d-1A0A075B699 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-1A0A075B699 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-1A0A075B699 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-1A0A075B699 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-1A0A075B699 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-1A0A075B699 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-1A0A075B699 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-1A0A075B699 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC13.29□□□□□ -0.28
Trav9d-1A0A075B699 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-1A0A075B699 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav9d-1A0A075B699 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trav9d-1A0A075B699 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-1A0A075B699 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-1A0A075B699 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-1A0A075B699 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-1A0A075B699 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-1A0A075B699 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-1A0A075B699 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trav9d-1A0A075B699 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-1A0A075B699 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-1A0A075B699 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-1A0A075B699 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-1A0A075B699 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9d-1A0A075B699 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav9d-1A0A075B699 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9d-1A0A075B699 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9d-1A0A075B699 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9d-1A0A075B699 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trav9d-1A0A075B699 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9d-1A0A075B699 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav9d-1A0A075B699 Gm29241-201ENSMUST00000189260 1096 ntBASIC13.28□□□□□ -0.28
Trav9d-1A0A075B699 Gm2559-201ENSMUST00000201323 363 ntBASIC13.28□□□□□ -0.28
Trav9d-1A0A075B699 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9d-1A0A075B699 Gm4968-201ENSMUST00000071458 858 ntBASIC13.28□□□□□ -0.28
Trav9d-1A0A075B699 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9d-1A0A075B699 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9d-1A0A075B699 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9d-1A0A075B699 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9d-1A0A075B699 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9d-1A0A075B699 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trav9d-1A0A075B699 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trav9d-1A0A075B699 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trav9d-1A0A075B699 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9d-1A0A075B699 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9d-1A0A075B699 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9d-1A0A075B699 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9d-1A0A075B699 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9d-1A0A075B699 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9d-1A0A075B699 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9d-1A0A075B699 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9d-1A0A075B699 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9d-1A0A075B699 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9d-1A0A075B699 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Trav9d-1A0A075B699 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav9d-1A0A075B699 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms