Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav18A0A075B656 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav18A0A075B656 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trav18A0A075B656 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav18A0A075B656 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.12□□□□□ -0.15
Trav18A0A075B656 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Trav18A0A075B656 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav18A0A075B656 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trav18A0A075B656 Mir6349-201ENSMUST00000184059 97 ntBASIC14.12□□□□□ -0.15
Trav18A0A075B656 Gm10138-203ENSMUST00000206952 366 ntBASIC14.12□□□□□ -0.15
Trav18A0A075B656 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav18A0A075B656 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav18A0A075B656 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav18A0A075B656 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav18A0A075B656 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav18A0A075B656 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav18A0A075B656 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.11□□□□□ -0.15
Trav18A0A075B656 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav18A0A075B656 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav18A0A075B656 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav18A0A075B656 Gm11643-201ENSMUST00000119578 864 ntBASIC14.11□□□□□ -0.15
Trav18A0A075B656 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC14.11□□□□□ -0.15
Trav18A0A075B656 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav18A0A075B656 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav18A0A075B656 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC14.11□□□□□ -0.15
Trav18A0A075B656 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC14.11□□□□□ -0.15
Trav18A0A075B656 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trav18A0A075B656 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav18A0A075B656 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav18A0A075B656 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav18A0A075B656 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav18A0A075B656 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav18A0A075B656 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Trav18A0A075B656 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav18A0A075B656 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav18A0A075B656 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav18A0A075B656 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav18A0A075B656 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav18A0A075B656 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.1□□□□□ -0.15
Trav18A0A075B656 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.1□□□□□ -0.15
Trav18A0A075B656 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav18A0A075B656 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav18A0A075B656 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Trav18A0A075B656 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.1□□□□□ -0.15
Trav18A0A075B656 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav18A0A075B656 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trav18A0A075B656 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav18A0A075B656 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav18A0A075B656 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Trav18A0A075B656 Gm15375-201ENSMUST00000119510 849 ntBASIC14.1□□□□□ -0.15
Trav18A0A075B656 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC14.1□□□□□ -0.15
Trav18A0A075B656 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trav18A0A075B656 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav18A0A075B656 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav18A0A075B656 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav18A0A075B656 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav18A0A075B656 Gm45560-201ENSMUST00000211492 1472 ntBASIC14.1□□□□□ -0.15
Trav18A0A075B656 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav18A0A075B656 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav18A0A075B656 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav18A0A075B656 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav18A0A075B656 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav18A0A075B656 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trav18A0A075B656 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav18A0A075B656 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav18A0A075B656 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav18A0A075B656 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.09□□□□□ -0.15
Trav18A0A075B656 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav18A0A075B656 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav18A0A075B656 Dio3-201ENSMUST00000097228 1449 ntBASIC14.09□□□□□ -0.15
Trav18A0A075B656 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav18A0A075B656 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav18A0A075B656 Gm12896-201ENSMUST00000118430 226 ntBASIC14.09□□□□□ -0.15
Trav18A0A075B656 Alkbh1-212ENSMUST00000185301 408 ntBASIC14.09□□□□□ -0.15
Trav18A0A075B656 Gm3807-201ENSMUST00000193520 1168 ntBASIC14.09□□□□□ -0.15
Trav18A0A075B656 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC14.09□□□□□ -0.15
Trav18A0A075B656 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Trav18A0A075B656 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC14.09□□□□□ -0.15
Trav18A0A075B656 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav18A0A075B656 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav18A0A075B656 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.09□□□□□ -0.15
Trav18A0A075B656 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav18A0A075B656 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav18A0A075B656 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trav18A0A075B656 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav18A0A075B656 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.09□□□□□ -0.15
Trav18A0A075B656 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trav18A0A075B656 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav18A0A075B656 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav18A0A075B656 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav18A0A075B656 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav18A0A075B656 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav18A0A075B656 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC14.08□□□□□ -0.15
Trav18A0A075B656 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav18A0A075B656 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav18A0A075B656 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav18A0A075B656 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trav18A0A075B656 Gm15039-201ENSMUST00000118914 875 ntBASIC14.08□□□□□ -0.16
Trav18A0A075B656 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC14.08□□□□□ -0.16
Trav18A0A075B656 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms