Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav16A0A075B653 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav16A0A075B653 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav16A0A075B653 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav16A0A075B653 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav16A0A075B653 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav16A0A075B653 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
Trav16A0A075B653 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav16A0A075B653 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav16A0A075B653 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav16A0A075B653 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav16A0A075B653 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trav16A0A075B653 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC13.34□□□□□ -0.27
Trav16A0A075B653 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav16A0A075B653 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav16A0A075B653 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav16A0A075B653 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav16A0A075B653 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav16A0A075B653 Gm45417-201ENSMUST00000209533 758 ntBASIC13.34□□□□□ -0.27
Trav16A0A075B653 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC13.34□□□□□ -0.27
Trav16A0A075B653 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav16A0A075B653 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav16A0A075B653 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav16A0A075B653 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav16A0A075B653 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav16A0A075B653 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav16A0A075B653 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav16A0A075B653 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav16A0A075B653 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav16A0A075B653 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav16A0A075B653 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC13.33□□□□□ -0.27
Trav16A0A075B653 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav16A0A075B653 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav16A0A075B653 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Trav16A0A075B653 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav16A0A075B653 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav16A0A075B653 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav16A0A075B653 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav16A0A075B653 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav16A0A075B653 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav16A0A075B653 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trav16A0A075B653 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav16A0A075B653 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav16A0A075B653 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trav16A0A075B653 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav16A0A075B653 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav16A0A075B653 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC13.33□□□□□ -0.28
Trav16A0A075B653 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC13.33□□□□□ -0.28
Trav16A0A075B653 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Trav16A0A075B653 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC13.33□□□□□ -0.28
Trav16A0A075B653 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav16A0A075B653 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav16A0A075B653 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav16A0A075B653 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav16A0A075B653 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav16A0A075B653 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Trav16A0A075B653 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav16A0A075B653 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav16A0A075B653 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav16A0A075B653 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav16A0A075B653 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav16A0A075B653 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav16A0A075B653 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav16A0A075B653 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav16A0A075B653 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav16A0A075B653 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav16A0A075B653 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav16A0A075B653 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav16A0A075B653 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav16A0A075B653 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav16A0A075B653 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav16A0A075B653 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav16A0A075B653 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav16A0A075B653 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav16A0A075B653 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav16A0A075B653 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC13.32□□□□□ -0.28
Trav16A0A075B653 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC13.32□□□□□ -0.28
Trav16A0A075B653 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav16A0A075B653 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav16A0A075B653 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav16A0A075B653 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav16A0A075B653 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav16A0A075B653 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav16A0A075B653 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav16A0A075B653 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav16A0A075B653 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav16A0A075B653 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav16A0A075B653 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav16A0A075B653 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Trav16A0A075B653 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav16A0A075B653 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav16A0A075B653 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav16A0A075B653 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trav16A0A075B653 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav16A0A075B653 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav16A0A075B653 Gm13234-201ENSMUST00000120010 747 ntBASIC13.31□□□□□ -0.28
Trav16A0A075B653 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC13.31□□□□□ -0.28
Trav16A0A075B653 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav16A0A075B653 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav16A0A075B653 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms