Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav6n-5A0A075B621 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trav6n-5A0A075B621 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6n-5A0A075B621 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6n-5A0A075B621 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.37□□□□□ -0.27
Trav6n-5A0A075B621 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6n-5A0A075B621 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6n-5A0A075B621 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6n-5A0A075B621 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6n-5A0A075B621 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6n-5A0A075B621 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6n-5A0A075B621 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6n-5A0A075B621 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6n-5A0A075B621 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6n-5A0A075B621 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6n-5A0A075B621 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6n-5A0A075B621 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6n-5A0A075B621 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6n-5A0A075B621 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6n-5A0A075B621 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6n-5A0A075B621 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6n-5A0A075B621 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6n-5A0A075B621 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6n-5A0A075B621 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6n-5A0A075B621 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6n-5A0A075B621 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6n-5A0A075B621 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6n-5A0A075B621 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6n-5A0A075B621 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6n-5A0A075B621 Gm43060-201ENSMUST00000200621 289 ntBASIC13.36□□□□□ -0.27
Trav6n-5A0A075B621 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav6n-5A0A075B621 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.36□□□□□ -0.27
Trav6n-5A0A075B621 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav6n-5A0A075B621 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6n-5A0A075B621 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6n-5A0A075B621 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6n-5A0A075B621 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6n-5A0A075B621 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav6n-5A0A075B621 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6n-5A0A075B621 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trav6n-5A0A075B621 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6n-5A0A075B621 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6n-5A0A075B621 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6n-5A0A075B621 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6n-5A0A075B621 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6n-5A0A075B621 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trav6n-5A0A075B621 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6n-5A0A075B621 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6n-5A0A075B621 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6n-5A0A075B621 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6n-5A0A075B621 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6n-5A0A075B621 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6n-5A0A075B621 AC131586.2-201ENSMUST00000228370 1512 ntBASIC13.35□□□□□ -0.27
Trav6n-5A0A075B621 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav6n-5A0A075B621 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6n-5A0A075B621 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6n-5A0A075B621 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6n-5A0A075B621 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC13.35□□□□□ -0.27
Trav6n-5A0A075B621 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC13.35□□□□□ -0.27
Trav6n-5A0A075B621 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav6n-5A0A075B621 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC13.35□□□□□ -0.27
Trav6n-5A0A075B621 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav6n-5A0A075B621 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6n-5A0A075B621 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6n-5A0A075B621 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trav6n-5A0A075B621 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.35□□□□□ -0.27
Trav6n-5A0A075B621 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6n-5A0A075B621 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6n-5A0A075B621 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6n-5A0A075B621 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6n-5A0A075B621 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6n-5A0A075B621 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6n-5A0A075B621 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6n-5A0A075B621 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6n-5A0A075B621 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6n-5A0A075B621 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6n-5A0A075B621 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6n-5A0A075B621 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6n-5A0A075B621 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6n-5A0A075B621 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC13.33□□□□□ -0.27
Trav6n-5A0A075B621 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav6n-5A0A075B621 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav6n-5A0A075B621 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.27
Trav6n-5A0A075B621 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6n-5A0A075B621 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6n-5A0A075B621 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6n-5A0A075B621 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6n-5A0A075B621 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6n-5A0A075B621 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6n-5A0A075B621 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6n-5A0A075B621 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6n-5A0A075B621 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6n-5A0A075B621 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Trav6n-5A0A075B621 Gm26833-201ENSMUST00000180899 440 ntBASIC13.33□□□□□ -0.28
Trav6n-5A0A075B621 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6n-5A0A075B621 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6n-5A0A075B621 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6n-5A0A075B621 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trav6n-5A0A075B621 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6n-5A0A075B621 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms