Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav7n-4A0A075B620 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7n-4A0A075B620 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7n-4A0A075B620 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav7n-4A0A075B620 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7n-4A0A075B620 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trav7n-4A0A075B620 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7n-4A0A075B620 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7n-4A0A075B620 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Trav7n-4A0A075B620 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trav7n-4A0A075B620 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7n-4A0A075B620 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7n-4A0A075B620 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7n-4A0A075B620 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7n-4A0A075B620 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trav7n-4A0A075B620 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Trav7n-4A0A075B620 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7n-4A0A075B620 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7n-4A0A075B620 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7n-4A0A075B620 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7n-4A0A075B620 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7n-4A0A075B620 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trav7n-4A0A075B620 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav7n-4A0A075B620 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav7n-4A0A075B620 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav7n-4A0A075B620 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav7n-4A0A075B620 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav7n-4A0A075B620 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav7n-4A0A075B620 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav7n-4A0A075B620 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav7n-4A0A075B620 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav7n-4A0A075B620 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav7n-4A0A075B620 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC13.07□□□□□ -0.32
Trav7n-4A0A075B620 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trav7n-4A0A075B620 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trav7n-4A0A075B620 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav7n-4A0A075B620 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav7n-4A0A075B620 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav7n-4A0A075B620 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav7n-4A0A075B620 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav7n-4A0A075B620 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav7n-4A0A075B620 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav7n-4A0A075B620 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav7n-4A0A075B620 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav7n-4A0A075B620 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav7n-4A0A075B620 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav7n-4A0A075B620 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav7n-4A0A075B620 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav7n-4A0A075B620 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav7n-4A0A075B620 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav7n-4A0A075B620 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav7n-4A0A075B620 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav7n-4A0A075B620 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav7n-4A0A075B620 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7n-4A0A075B620 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC13.06□□□□□ -0.32
Trav7n-4A0A075B620 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Trav7n-4A0A075B620 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7n-4A0A075B620 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7n-4A0A075B620 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav7n-4A0A075B620 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7n-4A0A075B620 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7n-4A0A075B620 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7n-4A0A075B620 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7n-4A0A075B620 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7n-4A0A075B620 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7n-4A0A075B620 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7n-4A0A075B620 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7n-4A0A075B620 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7n-4A0A075B620 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7n-4A0A075B620 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC13.06□□□□□ -0.32
Trav7n-4A0A075B620 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7n-4A0A075B620 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC13.06□□□□□ -0.32
Trav7n-4A0A075B620 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7n-4A0A075B620 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC13.06□□□□□ -0.32
Trav7n-4A0A075B620 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC13.06□□□□□ -0.32
Trav7n-4A0A075B620 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav7n-4A0A075B620 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7n-4A0A075B620 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7n-4A0A075B620 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7n-4A0A075B620 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Trav7n-4A0A075B620 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7n-4A0A075B620 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7n-4A0A075B620 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Trav7n-4A0A075B620 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7n-4A0A075B620 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7n-4A0A075B620 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7n-4A0A075B620 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7n-4A0A075B620 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7n-4A0A075B620 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7n-4A0A075B620 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav7n-4A0A075B620 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7n-4A0A075B620 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7n-4A0A075B620 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7n-4A0A075B620 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav7n-4A0A075B620 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav7n-4A0A075B620 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav7n-4A0A075B620 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav7n-4A0A075B620 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav7n-4A0A075B620 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav7n-4A0A075B620 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms