Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13d-1A0A075B606 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13d-1A0A075B606 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13d-1A0A075B606 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav13d-1A0A075B606 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trav13d-1A0A075B606 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Trav13d-1A0A075B606 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13d-1A0A075B606 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13d-1A0A075B606 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13d-1A0A075B606 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13d-1A0A075B606 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13d-1A0A075B606 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13d-1A0A075B606 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13d-1A0A075B606 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13d-1A0A075B606 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13d-1A0A075B606 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13d-1A0A075B606 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13d-1A0A075B606 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trav13d-1A0A075B606 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13d-1A0A075B606 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC12.64□□□□□ -0.39
Trav13d-1A0A075B606 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13d-1A0A075B606 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13d-1A0A075B606 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13d-1A0A075B606 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13d-1A0A075B606 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13d-1A0A075B606 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13d-1A0A075B606 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Trav13d-1A0A075B606 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trav13d-1A0A075B606 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13d-1A0A075B606 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13d-1A0A075B606 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13d-1A0A075B606 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trav13d-1A0A075B606 Gm43799-201ENSMUST00000201845 579 ntBASIC12.63□□□□□ -0.39
Trav13d-1A0A075B606 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC12.63□□□□□ -0.39
Trav13d-1A0A075B606 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC12.63□□□□□ -0.39
Trav13d-1A0A075B606 Otx2os1-204ENSMUST00000227221 751 ntBASIC12.63□□□□□ -0.39
Trav13d-1A0A075B606 Odf3b-204ENSMUST00000227834 930 ntBASIC12.63□□□□□ -0.39
Trav13d-1A0A075B606 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13d-1A0A075B606 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13d-1A0A075B606 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13d-1A0A075B606 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13d-1A0A075B606 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trav13d-1A0A075B606 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav13d-1A0A075B606 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13d-1A0A075B606 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13d-1A0A075B606 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13d-1A0A075B606 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Trav13d-1A0A075B606 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13d-1A0A075B606 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13d-1A0A075B606 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13d-1A0A075B606 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13d-1A0A075B606 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav13d-1A0A075B606 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav13d-1A0A075B606 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC12.62□□□□□ -0.39
Trav13d-1A0A075B606 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13d-1A0A075B606 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13d-1A0A075B606 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13d-1A0A075B606 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13d-1A0A075B606 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13d-1A0A075B606 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13d-1A0A075B606 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13d-1A0A075B606 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13d-1A0A075B606 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Trav13d-1A0A075B606 Gm11643-201ENSMUST00000119578 864 ntBASIC12.62□□□□□ -0.39
Trav13d-1A0A075B606 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13d-1A0A075B606 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Trav13d-1A0A075B606 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13d-1A0A075B606 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13d-1A0A075B606 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13d-1A0A075B606 Gm21814-202ENSMUST00000203277 873 ntBASIC12.62□□□□□ -0.39
Trav13d-1A0A075B606 Gm9987-201ENSMUST00000069768 567 ntBASIC12.62□□□□□ -0.39
Trav13d-1A0A075B606 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13d-1A0A075B606 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13d-1A0A075B606 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Trav13d-1A0A075B606 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13d-1A0A075B606 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13d-1A0A075B606 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13d-1A0A075B606 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13d-1A0A075B606 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav13d-1A0A075B606 Fcho2-208ENSMUST00000224992 2964 ntBASIC12.62□□□□□ -0.39
Trav13d-1A0A075B606 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav13d-1A0A075B606 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13d-1A0A075B606 AC121598.2-201ENSMUST00000228376 2325 ntBASIC12.61□□□□□ -0.39
Trav13d-1A0A075B606 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13d-1A0A075B606 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13d-1A0A075B606 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13d-1A0A075B606 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13d-1A0A075B606 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13d-1A0A075B606 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trav13d-1A0A075B606 Gm10517-202ENSMUST00000192970 758 ntBASIC12.61□□□□□ -0.39
Trav13d-1A0A075B606 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13d-1A0A075B606 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13d-1A0A075B606 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13d-1A0A075B606 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13d-1A0A075B606 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13d-1A0A075B606 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13d-1A0A075B606 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13d-1A0A075B606 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13d-1A0A075B606 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Trav13d-1A0A075B606 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms