Protein–RNA interactions for Protein: Q9CZQ6

Raet1e, Retinoic acid early-inducible protein 1-epsilon, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1eQ9CZQ6 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Raet1eQ9CZQ6 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Raet1eQ9CZQ6 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Raet1eQ9CZQ6 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Raet1eQ9CZQ6 Peli2-204ENSMUST00000226513 1320 ntBASIC21.02■□□□□ 0.95
Raet1eQ9CZQ6 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Raet1eQ9CZQ6 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Raet1eQ9CZQ6 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Raet1eQ9CZQ6 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Raet1eQ9CZQ6 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Raet1eQ9CZQ6 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Raet1eQ9CZQ6 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Raet1eQ9CZQ6 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Raet1eQ9CZQ6 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Raet1eQ9CZQ6 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Raet1eQ9CZQ6 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Raet1eQ9CZQ6 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Raet1eQ9CZQ6 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Raet1eQ9CZQ6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Raet1eQ9CZQ6 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Raet1eQ9CZQ6 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Raet1eQ9CZQ6 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Raet1eQ9CZQ6 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Raet1eQ9CZQ6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.95■□□□□ 0.94
Raet1eQ9CZQ6 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Raet1eQ9CZQ6 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Raet1eQ9CZQ6 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Raet1eQ9CZQ6 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Raet1eQ9CZQ6 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Raet1eQ9CZQ6 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Raet1eQ9CZQ6 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Raet1eQ9CZQ6 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Raet1eQ9CZQ6 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Raet1eQ9CZQ6 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Raet1eQ9CZQ6 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Raet1eQ9CZQ6 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Raet1eQ9CZQ6 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Raet1eQ9CZQ6 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Raet1eQ9CZQ6 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Raet1eQ9CZQ6 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Raet1eQ9CZQ6 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Raet1eQ9CZQ6 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
Raet1eQ9CZQ6 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Raet1eQ9CZQ6 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Raet1eQ9CZQ6 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Raet1eQ9CZQ6 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Raet1eQ9CZQ6 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Raet1eQ9CZQ6 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Raet1eQ9CZQ6 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Raet1eQ9CZQ6 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Raet1eQ9CZQ6 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.86■□□□□ 0.93
Raet1eQ9CZQ6 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Raet1eQ9CZQ6 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Raet1eQ9CZQ6 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Raet1eQ9CZQ6 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Raet1eQ9CZQ6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Raet1eQ9CZQ6 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.85■□□□□ 0.93
Raet1eQ9CZQ6 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Raet1eQ9CZQ6 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Raet1eQ9CZQ6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
Raet1eQ9CZQ6 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Raet1eQ9CZQ6 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Raet1eQ9CZQ6 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Raet1eQ9CZQ6 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Raet1eQ9CZQ6 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Raet1eQ9CZQ6 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Raet1eQ9CZQ6 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Raet1eQ9CZQ6 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Raet1eQ9CZQ6 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Raet1eQ9CZQ6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Raet1eQ9CZQ6 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Raet1eQ9CZQ6 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.81■□□□□ 0.92
Raet1eQ9CZQ6 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Raet1eQ9CZQ6 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Raet1eQ9CZQ6 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Raet1eQ9CZQ6 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Raet1eQ9CZQ6 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Raet1eQ9CZQ6 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Raet1eQ9CZQ6 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Raet1eQ9CZQ6 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Raet1eQ9CZQ6 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Raet1eQ9CZQ6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Raet1eQ9CZQ6 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.78■□□□□ 0.92
Raet1eQ9CZQ6 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.78■□□□□ 0.92
Raet1eQ9CZQ6 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Raet1eQ9CZQ6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Raet1eQ9CZQ6 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Raet1eQ9CZQ6 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.77■□□□□ 0.92
Raet1eQ9CZQ6 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Raet1eQ9CZQ6 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Raet1eQ9CZQ6 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Raet1eQ9CZQ6 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
Raet1eQ9CZQ6 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Raet1eQ9CZQ6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Raet1eQ9CZQ6 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Raet1eQ9CZQ6 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Raet1eQ9CZQ6 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Raet1eQ9CZQ6 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Raet1eQ9CZQ6 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Raet1eQ9CZQ6 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms