Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
Nkx6-1Q99MA9 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Nkx6-1Q99MA9 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Nkx6-1Q99MA9 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Nkx6-1Q99MA9 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Nkx6-1Q99MA9 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Nkx6-1Q99MA9 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
Nkx6-1Q99MA9 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Nkx6-1Q99MA9 Scarna2-201ENSMUST00000157560 414 ntBASIC22.8■■□□□ 1.24
Nkx6-1Q99MA9 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Nkx6-1Q99MA9 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
Nkx6-1Q99MA9 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Nkx6-1Q99MA9 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Nkx6-1Q99MA9 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
Nkx6-1Q99MA9 Gm11687-201ENSMUST00000118911 886 ntBASIC22.75■■□□□ 1.23
Nkx6-1Q99MA9 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Nkx6-1Q99MA9 Gm30023-201ENSMUST00000197970 889 ntBASIC22.75■■□□□ 1.23
Nkx6-1Q99MA9 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Nkx6-1Q99MA9 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Nkx6-1Q99MA9 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC22.75■■□□□ 1.23
Nkx6-1Q99MA9 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
Nkx6-1Q99MA9 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Nkx6-1Q99MA9 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.74■■□□□ 1.23
Nkx6-1Q99MA9 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.74■■□□□ 1.23
Nkx6-1Q99MA9 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Nkx6-1Q99MA9 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Nkx6-1Q99MA9 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Nkx6-1Q99MA9 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Nkx6-1Q99MA9 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.73■■□□□ 1.23
Nkx6-1Q99MA9 Gm12366-201ENSMUST00000121722 873 ntBASIC22.73■■□□□ 1.23
Nkx6-1Q99MA9 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.73■■□□□ 1.23
Nkx6-1Q99MA9 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Nkx6-1Q99MA9 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.73■■□□□ 1.23
Nkx6-1Q99MA9 Gm5786-201ENSMUST00000085368 882 ntBASIC22.73■■□□□ 1.23
Nkx6-1Q99MA9 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Nkx6-1Q99MA9 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Nkx6-1Q99MA9 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC22.72■■□□□ 1.23
Nkx6-1Q99MA9 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Nkx6-1Q99MA9 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.71■■□□□ 1.23
Nkx6-1Q99MA9 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
Nkx6-1Q99MA9 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Nkx6-1Q99MA9 Gm9806-201ENSMUST00000051080 552 ntBASIC22.71■■□□□ 1.23
Nkx6-1Q99MA9 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Nkx6-1Q99MA9 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Nkx6-1Q99MA9 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC22.7■■□□□ 1.22
Nkx6-1Q99MA9 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Nkx6-1Q99MA9 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Nkx6-1Q99MA9 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Nkx6-1Q99MA9 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Nkx6-1Q99MA9 Gm16437-201ENSMUST00000025669 507 ntBASIC22.68■■□□□ 1.22
Nkx6-1Q99MA9 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Nkx6-1Q99MA9 Gm4799-201ENSMUST00000095396 657 ntBASIC22.68■■□□□ 1.22
Nkx6-1Q99MA9 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Nkx6-1Q99MA9 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Nkx6-1Q99MA9 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Nkx6-1Q99MA9 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Nkx6-1Q99MA9 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Nkx6-1Q99MA9 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Nkx6-1Q99MA9 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC22.62■■□□□ 1.21
Nkx6-1Q99MA9 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Nkx6-1Q99MA9 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC22.6■■□□□ 1.21
Nkx6-1Q99MA9 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.6■■□□□ 1.21
Nkx6-1Q99MA9 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Nkx6-1Q99MA9 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Nkx6-1Q99MA9 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Nkx6-1Q99MA9 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Nkx6-1Q99MA9 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
Nkx6-1Q99MA9 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.58■■□□□ 1.21
Nkx6-1Q99MA9 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.57■■□□□ 1.2
Nkx6-1Q99MA9 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
Nkx6-1Q99MA9 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Nkx6-1Q99MA9 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Nkx6-1Q99MA9 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Nkx6-1Q99MA9 Pcf11-205ENSMUST00000208255 1720 ntBASIC22.56■■□□□ 1.2
Nkx6-1Q99MA9 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Nkx6-1Q99MA9 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Nkx6-1Q99MA9 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC22.55■■□□□ 1.2
Nkx6-1Q99MA9 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Nkx6-1Q99MA9 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Nkx6-1Q99MA9 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
Nkx6-1Q99MA9 Gm7332-201ENSMUST00000118351 454 ntBASIC22.54■■□□□ 1.2
Nkx6-1Q99MA9 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC22.54■■□□□ 1.2
Nkx6-1Q99MA9 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC22.54■■□□□ 1.2
Nkx6-1Q99MA9 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Nkx6-1Q99MA9 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Nkx6-1Q99MA9 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Nkx6-1Q99MA9 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Nkx6-1Q99MA9 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Nkx6-1Q99MA9 Gm27502-201ENSMUST00000183495 199 ntBASIC22.52■■□□□ 1.2
Nkx6-1Q99MA9 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Nkx6-1Q99MA9 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC22.51■■□□□ 1.19
Nkx6-1Q99MA9 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Nkx6-1Q99MA9 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Nkx6-1Q99MA9 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Nkx6-1Q99MA9 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.5■■□□□ 1.19
Nkx6-1Q99MA9 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Nkx6-1Q99MA9 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Nkx6-1Q99MA9 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Nkx6-1Q99MA9 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Nkx6-1Q99MA9 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 9.4 ms